Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3775 ATGGAAAACACCGAACAAGGAAACTTTTCTGAGTTATTGTCTGAGCTAATAGGTTTGGCTGATGAAGTTGCTTCCACTGCTCATAACTGTGAAATTGAAAAGAATGCTTTTGCTGAGTTTGCCATACTAGTAGAGGAATTTGCACCAATCTTCAGTGATTTGAGAGACAAAAGCACGGTCATGGACAAGCAACCTATAAGAAAATCGTTGGAATCTCTTAAGAATGAGCTTAGGCGTGCTAAGGCTTTGACAAAAAGCCTTAATCAGAAACATCTTATTAAACAGATAGAGGACATAACTCATGATCTTGGTCGATCATTGGGGCTGCTTCTTGTGTCCAGCCTTGAAGTGTCCACTGATTCTAGAGAAAATATTAGTACATTGCAGAGAAAGTTGATGGGTGCTAGATTTGGTGGAAATATAAGTTCAGCTTCCACTCCAAGATCAGAGTTTGTCAGTGATGTGAAGCTTGAAGGGGAAATAGAAGAAGAAATAGTGGAATTCACTCTCGGTGATGTTATATTGCAACTTAAACATGGTAATGATGAAGAATTCACAGTGGCACTTTTGAGACTAAAGGGGTTCATGAGAGATGAAAAAGCAGATTATGATTTAATTAATGAGGAAGTGCTTGTTGCCATTCTAATGAATCGACTAGGTTCAAGTAAGGCTGACAATAGACTGACCATCCTTCAATTTCTAAGAAGCATTGCTTTTGGCAATGATAAAAAGAAGGAGAAGATGTCAGATATCGAGTTTTTATCAACTGTGGTGAAGTCTCTCTCGAGAGAAGCAGAAGAAAGGAGAGAAGCAGTGGGGCTTTTACTAGACCTCTCTAACCTCCCTTCAGTCAAGCGACGAATAGGAAGAATTCAAGGGTGCATTGTTATGCTGGTCTCTATTCTTAATGGAGATGATCCTGTTGCTTCACATGATTCAGCAAAGTTGTTGGATATATTGTCTAGTAATTCTCAAAATGCTCTTCACATGGCAGAGGCCGGTTACTTTAAGCCACTAGTGCAGTGTTTGAAGGAAGGGTCTGACATGACCAAGATCCTCATGGCAACAGCACTGTCGAGATTGGAGCTGACTGATCACAGCAAATTCACACTTGGAGAAGATGGGGTGATTGAGCCTCTAGCCAACATGTTTACTTATGGGAATCTGGAATCCAAGTTATCAGCTCTAAACGCGCTGCAAAATTTGTCGAGCTTGACAGAAAATGCACAGCGTTTGATCAGATCAGGAATTGTGATATCTCTGCTACAACTTCTTTTCTCTGTGACATCTGTGCTCATGACTCTTCGGGAGCCTGTATCAGCTATTCTCGCAAGAATTGCTCAGTCAGAGCCCTTGCTTATTAATCCAGAGGCAGCTCAGCAGATGCTCTCACTTTTGAACCTTTCCAGCCCAATAATTCAGATTCATCTATTTGAAGCACTAGATAGCATTGCTGCTCATCCGGGTGCCTCAAAAGTGAGGAAAAAAATGAAGGAAAAAGGTGCACTTCAGCTTGTTTTACCTTTCCTGATGGAAACCGACACTAAAATCCAGAGCAAGGCCTTGCAATTTCTGTACACTCTCTCCAAAGATCTAACAGAAGAGTTGACGGAACATCTTGATGAAACCCATCTTTTCAATATTGTCAATATCATCTCATCACCAACATCTGGGAGTGAAAAGGCTGTTGCTGTTGGTTTACTGAGTAACCTTCCTGTCAGTGACAAGAAAGTGACAGATGCACTGAAGAGGGCAAATTTGCTCCCTATTTTAACATCCATCATGTCATCGAGCACAGGAAGTAATTCATCCACAACAAGTTTGTTAATGCAGAATGTTGTGGGTGTCATAATCCGGTTCACAAATCCTTCTGACAAAAAACTACAACTTCTCTCAGCAGAACACGGGGTAATCCCTTTGCTCATAAAACTTCTCTCAACTGGCTCACCGATCACGAAATCCAGGGCTGCAACCTCACTTGCTCAATTATCCCAGAATTCTGTGTCTCTTAGGAGGTTTAGAAAATCAAGATGGTTTTGTGTTCCTCCCTCAGCAGATGCCCATTGTGAAGTTCATGACAGTAATTGCGTCGTGAAAAGCACATTTTGTTTGGTCAAAGCCGGTGCTGTCCCTCCGCTTATCCAAATATTAGAAGATAAAGAGAAGGAAGCTGTTGAAGCTGCTTTGATTGCCCTCTCAACTCTATTACAAGATGAAATATGGGAAGGTGGTGTGAACTGCATAGCTAAATCCTCAGGTGTTCAGGCTATTATAAAGATTTTAGAAGTGGAGGATGTAAAGATCCAAGAGAAAGCACTTTGGATGTTGGAGAGGATATTCAGGGTTGAAGAACACAGGGTTAATTTTATAGAATCTGCTCAGGTTGTTCTCATTGATCTGGCTCAGAAGAGTGATTCTAGAATGAAGTCAGCAGTTGCAAAAGTATTAGCTGAGCTAGATCTCTTGCAATATCAATCAAGTTACTTCTAG 2490 0.4108 MENTEQGNFSELLSELIGLADEVASTAHNCEIEKNAFAEFAILVEEFAPIFSDLRDKSTVMDKQPIRKSLESLKNELRRAKALTKSLNQKHLIKQIEDITHDLGRSLGLLLVSSLEVSTDSRENISTLQRKLMGARFGGNISSASTPRSEFVSDVKLEGEIEEEIVEFTLGDVILQLKHGNDEEFTVALLRLKGFMRDEKADYDLINEEVLVAILMNRLGSSKADNRLTILQFLRSIAFGNDKKKEKMSDIEFLSTVVKSLSREAEERREAVGLLLDLSNLPSVKRRIGRIQGCIVMLVSILNGDDPVASHDSAKLLDILSSNSQNALHMAEAGYFKPLVQCLKEGSDMTKILMATALSRLELTDHSKFTLGEDGVIEPLANMFTYGNLESKLSALNALQNLSSLTENAQRLIRSGIVISLLQLLFSVTSVLMTLREPVSAILARIAQSEPLLINPEAAQQMLSLLNLSSPIIQIHLFEALDSIAAHPGASKVRKKMKEKGALQLVLPFLMETDTKIQSKALQFLYTLSKDLTEELTEHLDETHLFNIVNIISSPTSGSEKAVAVGLLSNLPVSDKKVTDALKRANLLPILTSIMSSSTGSNSSTTSLLMQNVVGVIIRFTNPSDKKLQLLSAEHGVIPLLIKLLSTGSPITKSRAATSLAQLSQNSVSLRRFRKSRWFCVPPSADAHCEVHDSNCVVKSTFCLVKAGAVPPLIQILEDKEKEAVEAALIALSTLLQDEIWEGGVNCIAKSSGVQAIIKILEVEDVKIQEKALWMLERIFRVEEHRVNFIESAQVVLIDLAQKSDSRMKSAVAKVLAELDLLQYQSSYF 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3775 829 Gene3D - 366 677 IPR011989 -
Acco02g3775 829 SMART arm_5 364 404 IPR000225 GO:0005515
Acco02g3775 829 SMART arm_5 405 448 IPR000225 GO:0005515
Acco02g3775 829 SMART arm_5 741 781 IPR000225 GO:0005515
Acco02g3775 829 SMART arm_5 323 363 IPR000225 GO:0005515
Acco02g3775 829 SMART arm_5 490 530 IPR000225 GO:0005515
Acco02g3775 829 SMART arm_5 696 737 IPR000225 GO:0005515
Acco02g3775 829 SMART arm_5 625 665 IPR000225 GO:0005515
Acco02g3775 829 Gene3D - 167 365 IPR011989 -
Acco02g3775 829 SUPERFAMILY ARM repeat 435 784 IPR016024 -
Acco02g3775 829 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 174 829 - -
Acco02g3775 829 SUPERFAMILY ARM repeat 170 425 IPR016024 -
Acco02g3775 829 Coils Coil 70 90 - -
Acco02g3775 829 Gene3D - 10 101 IPR036537 GO:0007166
Acco02g3775 829 Gene3D - 686 825 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3775 Acco-ChrAcco02 53218496 53221573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3775 180 829 U-box Gene Family AT1G20780 28.571 3.32e-48 182