Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3772 ATGGGCCTGCTTGTATATGAGAGATCATTACAACTTATAATAAAATTGGGAAGAAAAATGGGTTGCATTAACTCTAAGAAGGCATTTGCCAGAGATTCACCTAAATATGTGCGTTCGGTATCGGCGTCAACCACCGATAAGAGGTCATTGGTTGCGGAGCCTCCTTCCAGAGTCCAATCTGGGGTTCTGACTTCTGAGACCAAAGCGGAACAACAACCATCGGAGGATCGGATACAGGACGGGAAGAAATTTAGGAAGAACAATTCTAGAGGAACTGATTCTTTAAGAATTTCGCATAGGTTCGTGGAAGCAGAACAGAATGCCGCCGGATGGCCTCCTTGGCTCACCTCTGTTGCAGGAGAAGCTATTCAAGGATGGGTGCCTCGCAAGGCAGATTCATTTGAGAAATTAGACAAGATTGGACAAGGTACATATAGTAGTGTGTTCCGGGCACGGGAGGTTGAAACTGGGAGGATGGTTGCCCTGAAGAAGGTACACATTGAGAATTTTCATCCTGAGAGCATTAGGTTCATGGCAAGAGAAATAGCAATCCTACGCAGGTTTGACCACCCAAACGTCATGAAATTGGAAGGTATAATTACGTCACGGCTCTCAAGTAGCATATACCTTGTTTTTGAGTACATGGAACATGACCTTGCTGGCCTAGTATCCTCTCCAGACATCAAGTTCAATGAGACTCAGGTTAAATGTTACATGAGGCAATTGTTAAGTGGACTTGAACACTGCCACATTCATGGAGTTATGCACCGTGACATCAAAACATCCAATATATTGGTAAATAATGAAGGTGTTCTCAAGATAGGCGATTTTGGATTAGCAAATACCCTTAACAACAACAAGTATCACCTGACCAGCTGTGTGGTGACTCTATGGTATCGTCCTCCTGAACTTCTGATGGGATCAACAAACTATGGTATATCGGTGGATCTATGGAGTGTTGGCTGTGTATTTGCAGAACTTTTTCTGGGAAAACCTCTTCTTAAGGGGAGGACTGAAGTTGAACAATTACACAAAATATTTAAACTTTGTGGCTCTCCACCTGATGAATTTTGGAAAAAGTCTAAGCTTCCTCTTGCAACAATGTTTAAACCTCATACTCATTATGAATGCTCTCTCAGGGAGCATTGTAAAGACTTTCCAGCTTCGGCTGTAAACTTAATTGAGACTTTACTTTCCCTTGACCCAAGTGGACGTGGGACTGCCTCCTCTGCCCTAATGTCTGAGTATTTCAGCACCAATCCATATGCTTGTGATCCATCAATGCTGCCAAAGTATCCACCTCGAAAAGAAATGGATGTCAGGAATTGGGAAGAAGCACATAGGAGAAAAGCTGGCGGTAAAGTGCAAGAGGCTACAAAACCAAGAAAACAAAAGCGAGTCCATAAAGTTTTGCAAGGACCAACATACGTCAATAATTTGGCTCCAAGAAAAGAGGAAATGCAGAACATCTCTCAAAACGCTCGTAAAGATGATGGAAAATTGCATCTTCCTAAGGAAAAAGGAGGAGCTATGCATAAAGGGGCATCAAAGCCATCATCAAATGCAACGTCAGGGGCTACACGCGTATTAACGGATGAATCTCAAGGCTTTAGTGTACCAATGCAAGTCCCAGGATCCAATGACTTTACATGGAGCAAAAACAGAAAAGGAGATTCTACATCTACTTTGTCAGATGGCTCAAAAAGCAAAATTAGTGCACTTGATCCATCATTTGCAAAAGGAACCTATGATTTAACCAAACAAAGCACAGATTTATCAGAAAGAAAATATATTGGTAATGCAAGTCATCATAACAAAACTTACAACAACCATCGACAACAAAAGCATCAGACAACAACCGAAGAATACAATTATACAAATGATGATCCATCAGAACAAACAGATATTGTGATAAATCCTCCGAGCCACAGAAAGCAAGGTGACCTCCCTGAATTATCAAAACCCCAAGTATCTCGACCAAATAGAATCATTGAGTCATCACAGAGGAATGAAAATGGTATTTCTCGATCAACTCGCAAATCAAGACTAGGAAGAGCATTTCATCCATTGCTAAACTATGAGACTGCATCTGAAGTACTGAGACAGACATCTGACATGATCTCGTCTGACATATTTGACAGCGTTACCCTACTTCAATTACAAGAGTTTTATCAATTTATGGTAATCGGCAAGATTAACACCGAGATGTAG 2211 0.4138 MGLLVYERSLQLIIKLGRKMGCINSKKAFARDSPKYVRSVSASTTDKRSLVAEPPSRVQSGVLTSETKAEQQPSEDRIQDGKKFRKNNSRGTDSLRISHRFVEAEQNAAGWPPWLTSVAGEAIQGWVPRKADSFEKLDKIGQGTYSSVFRAREVETGRMVALKKVHIENFHPESIRFMAREIAILRRFDHPNVMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPDIKFNETQVKCYMRQLLSGLEHCHIHGVMHRDIKTSNILVNNEGVLKIGDFGLANTLNNNKYHLTSCVVTLWYRPPELLMGSTNYGISVDLWSVGCVFAELFLGKPLLKGRTEVEQLHKIFKLCGSPPDEFWKKSKLPLATMFKPHTHYECSLREHCKDFPASAVNLIETLLSLDPSGRGTASSALMSEYFSTNPYACDPSMLPKYPPRKEMDVRNWEEAHRRKAGGKVQEATKPRKQKRVHKVLQGPTYVNNLAPRKEEMQNISQNARKDDGKLHLPKEKGGAMHKGASKPSSNATSGATRVLTDESQGFSVPMQVPGSNDFTWSKNRKGDSTSTLSDGSKSKISALDPSFAKGTYDLTKQSTDLSERKYIGNASHHNKTYNNHRQQKHQTTTEEYNYTNDDPSEQTDIVINPPSHRKQGDLPELSKPQVSRPNRIIESSQRNENGISRSTRKSRLGRAFHPLLNYETASEVLRQTSDMISSDIFDSVTLLQLQEFYQFMVIGKINTEM 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3772 736 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Acco02g3772 736 MobiDBLite consensus disorder prediction 659 679 - -
Acco02g3772 736 MobiDBLite consensus disorder prediction 493 574 - -
Acco02g3772 736 FunFam probable serine/threonine-protein kinase At1g54610 217 457 - -
Acco02g3772 736 MobiDBLite consensus disorder prediction 447 466 - -
Acco02g3772 736 MobiDBLite consensus disorder prediction 70 91 - -
Acco02g3772 736 SUPERFAMILY Protein kinase-like (PK-like) 128 424 IPR011009 -
Acco02g3772 736 Pfam Protein kinase domain 134 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3772 736 MobiDBLite consensus disorder prediction 516 571 - -
Acco02g3772 736 CDD STKc_CDK9_like 134 417 - -
Acco02g3772 736 PANTHER CELL DIVISION PROTEIN KINASE 132 421 - -
Acco02g3772 736 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
Acco02g3772 736 SMART serkin_6 134 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3772 736 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Acco02g3772 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Acco02g3772 736 MobiDBLite consensus disorder prediction 619 640 - -
Acco02g3772 736 MobiDBLite consensus disorder prediction 41 91 - -
Acco02g3772 736 ProSiteProfiles Protein kinase domain profile. 134 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3772 736 MobiDBLite consensus disorder prediction 493 512 - -
Acco02g3772 736 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Acco02g3772 736 MobiDBLite consensus disorder prediction 601 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3772 Acco-ChrAcco02 53201377 53208794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3772 126 567 Core Cell Cycle Gene Families AT5G10270 40.693 1.28e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco02g3772 Pkinase 5.4e-69 CL0016