Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3771 ATGGCCGCTAAAAATGGCCATCCGGCACCGCAGCCTCGTCCTACCATCACTCTCCCGCCACGACCTTCCATGGAAGCCTTCTTCACCGGTGGACTCGGTCTAAGCCCTGGCCCCATGACTCTCGTCTCCAGCTTCTTCTCCGACACCTACCGTGACTCTGATTGCCGCTCTTTCTCCCAGCTGCTCGCCGGAGCCATGGCTTCGCCGCTTGCTCTCGGCGCCACGCCTAGTTTCCTCCCGGACAATTCCACCACTTCTGAGGATGGAGCAAAGAAGAATTTGGGGTTCAAGCAGAGTAGACCAATGAATTTGGTTGTTGCTCGTTCCCCAATGTTTACAATCCCACCTGGGCTTAGCCCTTCTGGTTTGCTCAATTCTCCGGGCTTCTTTTCGCCGCAGAGCCCCTTCGGGATGTCCCACCAACAGGCTCTAGCACAGGTCACAGCTCAAGCTGTCCTAGCACAATCACAAATGCATGTGCCAGCTGATTTTCACCCATCTTCGGTAACAGCCCCTTCTGAACCATTGGCAGTGCAGCCATCTTGTGCTCCAGGTGAAGGATCAGAGCTGCAACTACCATCAGTATTAGAACCTAAAGGTGCCTTAGTGGAAATACCAGAAATTTCTCAAGCTGATAACAAATATCAAACTTCATCTATGGGTGTTGACAAACCAGTAGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCACGTCAAGGGGAGTGAGTATCCACGGGGCTACTACAGGTGTACCTATCTGAATTGCCCTGTAAAGAAAAAGATTGAGCGTGCTATTGATGGCCATATAACTGAAATTATCTATAATGGTCAGCATAACCATGAAAAGCCTCAGCCAAATAGGCGTGCTGCAAAAGATAATTGTGAATCAAATGAAGATAAAAGCATTCAGGTCATGCCTGAGTCAAACACACAGGGTAGGGTTGGAAATTCAAATGAGTTAGGTGAAAGCATGCCTGACCATTCAATGCCTGAGAGTGACCTGAACTCCAATCAAGAGGCTCCAAAACAGTCATCTGGAGCAAGTGAGAGTGAGGAAGCACTTGGTGCAAATATTACAGAAGAAGATGGAGATGTTGGTGAGCCAAACCCAAAAAGGAGGAGCACTGAGGCTGGAGCTTCTGAAGCATCTTTATCCCAAAAGACTGTTACAGAACCTAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTGTTAGATGATGGCTACAGGTGGCGTAAGTATGGCCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTAGTGCAGGGTGTAATGTGCGTAAGCATGTTGAGAGATCTTCAACAGACCCTAAAGCTGTCATAACTAAGTATGAGGGTAAACATAACCATGATGTGCCTGCTTCTAGAAATGGCAGCCATACCACAGCTACTACCAATTCAATGCCTTTAAAACCACACAGAGTGATTCCTGGGAAACATCCTTTGCTTAAAGATATGGATTTTGGGAACAATGACCAAAGGCCAGCTGTTTTACGCTTAAAAGAAGAGCAAAAAGGAGTATAA 1566 0.47 MAAKNGHPAPQPRPTITLPPRPSMEAFFTGGLGLSPGPMTLVSSFFSDTYRDSDCRSFSQLLAGAMASPLALGATPSFLPDNSTTSEDGAKKNLGFKQSRPMNLVVARSPMFTIPPGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSQMHVPADFHPSSVTAPSEPLAVQPSCAPGEGSELQLPSVLEPKGALVEIPEISQADNKYQTSSMGVDKPVDDGYNWRKYGQKHVKGSEYPRGYYRCTYLNCPVKKKIERAIDGHITEIIYNGQHNHEKPQPNRRAAKDNCESNEDKSIQVMPESNTQGRVGNSNELGESMPDHSMPESDLNSNQEAPKQSSGASESEEALGANITEEDGDVGEPNPKRRSTEAGASEASLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERSSTDPKAVITKYEGKHNHDVPASRNGSHTTATTNSMPLKPHRVIPGKHPLLKDMDFGNNDQRPAVLRLKEEQKGV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3771 521 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 126 480 IPR044810 GO:0003700
Acco02g3771 521 SMART WRKY_cls 407 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 SMART WRKY_cls 226 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 MobiDBLite consensus disorder prediction 283 300 - -
Acco02g3771 521 MobiDBLite consensus disorder prediction 1 22 - -
Acco02g3771 521 SUPERFAMILY WRKY DNA-binding domain 224 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 FunFam WRKY transcription factor 213 286 - -
Acco02g3771 521 Gene3D WRKY domain 210 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 Gene3D WRKY domain 392 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 ProSiteProfiles WRKY domain profile. 402 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 MobiDBLite consensus disorder prediction 278 391 - -
Acco02g3771 521 MobiDBLite consensus disorder prediction 469 483 - -
Acco02g3771 521 MobiDBLite consensus disorder prediction 459 521 - -
Acco02g3771 521 MobiDBLite consensus disorder prediction 301 354 - -
Acco02g3771 521 FunFam WRKY transcription factor 57 393 467 - -
Acco02g3771 521 Pfam WRKY DNA -binding domain 227 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 Pfam WRKY DNA -binding domain 408 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 SUPERFAMILY WRKY DNA-binding domain 399 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g3771 521 ProSiteProfiles WRKY domain profile. 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3771 Acco-ChrAcco02 53198109 53201225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3771 13 518 WRKY Transcription Factor Family AT2G03340 49.153 9.80e-139 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco02g3771 WRKY 5.9e-25 CL0274