Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3765 ATGGCGGCTGCAAAACCCCAGAGGACTCCTCAAGAAGTTGAGGATATAATTATCAGGAAAATTTTTCTTATCTCCCTCACTGATGCCACGGGAAACGATCCTAGAGTCGTTTATATGGAATTGACAGCAGCTGTGATGCTCAGTGAAGGCAAGGAATTGAGGATTTCACGGGACATGATGGAAGATATTCTGATGGATCGGCTTTCTGGGAGTTACTCTTCAGTGGAATCGCCTTTTCAGTACTTAATCGGTTGCTATCAACGAGCACACGATGAGGGTAAGAAAATTGCAAACATGAAAGATAAAAGTTTGAGGGGTGAGATGGAATCCGTGGTGAGAGAAGCAAAGAAGTTGTGTGTAACGTTTTGTAGAATGGATTTGGCGAATCCTGGCACGTTTCAAAGTGGAAATTCTAGTGCGAGTAAACAGCAGAACTCGCCATTGTTGCAACTTATTCTCTCTGAGGTTGGTGGCACCATAAATGGCTTCGGTGGCAGTGGCAACGCCGGTGGAATTAAAAGTCCGCCTGGATTTCTGGAGGAATTTTTCAGGGACTCACACTCGGATTTGGATACAATATTGAAAGGCTTGTATGAGGAATTGAGGGGCAGTGTGGTGAAAGTTTCGGCTCTTGGGAATTTCCAAGACTCTTTGAGGGCATTACTGTTTCTGGTTAGATTTCCAATTGGTGCAAAGTCTCTTGTTTACCACGCTTGGTGGATTCCTAAAGGAGTTTACATGCATGGACGTGCAATTGAAATGACAAGCATTATAGGCCCTTTCTTTCATATTAGCCCCCTTCCTGATTATGGCTTTTTCAAGAGCCAGCCTGACGTTGGGCAGCAGTGCTTTTCAGATTCATCTACCCGCCGTCCATCTGATTTGCTATCTTCCTTCACCACGATTAAAACTGTCATGAATAACTTATATGATGGCCTGAGTGAGCTTCTCCTCATTCTTCTGAAAAGTACAGATTATCGTGAAAATGTACTACAGTATCTTGCTGAGGTAATCAATAGAAACGCATCCAGGGCTCATATACAGGTTGATCCTATGACTTGTGCAAGTTCAGGCATGTTTGTAAATCTTAGTGCTGTTATGCTTCGTCTCTGTGAACCGTTTTTGGATGCAAATTTAACAAAAAGGGATAAGATTGATGCAAAATATGTCTACCATTCACACCGTCTGGATTTAAGCGGGTTGACTGCCCTTCAAGCAACTTCTGAGGAAGTTGCTGAATGGATAAAGAGTAATGATGGTGCGAAACGTTTGCAACAATCTCAGGAAGCAACCAGTTCTGGTAGTAACAATGCTGGTGGCCCTTCAAATGCAAAGCTTGCATCACATGCTGAAAAGACAAAATACCCATTTATTTGTGAATGCTTCTTTATGACTGCAAGAGTGCTTAACTTAGGCCTCTTGAAAGCATTTTCTGACTTCAAACACTTAGTTCAGGATCTTTCTAGGTGTGAAGATTCTCTTTCAACACTCAAAGACATGCAGGCACAGTCATCCTCTCCTCAGTTGGAGTTAGACATAGCTCGACTTGAGAAAGAAATAGAGTTGTACTCTCAGGAAAAGCTTTGTTATGAAGCTCAGATATTGCGGGATAACACATTTATTCAAAATGCTCTTTCCTTCTACCGTTTGATGATTGTTTGGTTGGTTGGCTTGGTCGGGGGATTTAAGATGCCTCTACCATCAACTTGCCCAATGGAATTTGCTTCCATGCCCGAGCATTTTGTAGAAGATGCAATGGAATTGCTCATATTTGCTTCTCGGATTCCAAAAGCCTTAGATGGTGTTGTGCTGGATGAATTCATGAACTTTATAATTATGTTCATGGCCAGTCCTGAATTTATCAAAAACCCATATTTGAGAGCAAAGATGGTTGAAGTCTTGAATTGCTGGATGCCTCGTAGAAGTGGCTCATCGGCTACAGCCACTCTATTTGAAGGGCACCAGCTGTCTCTTGAGTATCTTGTGAGGAATCTTTTGAAGCTTTACGTTGACATTGAGTTCACTGGTTCTCACACTCAGTTTTATGACAAGTTCAACATCCGCCATAATATTGCCGAACTGCTAGAATACCTGTGGCAGGTCCCTAGTCATCGTAATGCCTGGAGACAGATTGCTAAAGAAGAGGAAAAGGGCGTCTATCTAAATTTCTTAAACTTCCTGATCAATGATAGTATTTATCTTCTAGATGAAAGTTTAAACAAAATTCTTGAGCTAAAAGAATTGGAAGCTGAGATGTCAAATACCACTGAATGGGAGCAACGACCAGCTCAAGAAAGGCAGGAGAGGACACGGCTATTCCACTCACAAGAAAATATTATTCGAATAGACATGAAGTTGGCAAATGAAGATGTCAGTATGCTTGCATTTACTTCAGAACAGATTACAGCTCCTTTCCTCCTTCCTGAGATGGTTGAAAGAGTAGCCAGCATGCTCAATTACTTTCTTCTGCAACTGGTGGGTCCCCAAAGAAAATCGCTTACTCTGAAAGATCCTGAAAAGTATGAATTCCGTCCCAAGCATTTGCTTAAGCAGATTGTGCATATTTATGTTCATCTAGCCAGAGGTGATACCAACAACATCTTCCCATCTGCCATCTCTAAGGATGGACGATCATATAATGACCAGCTGTTTAGTGCTGCAGCAGATGTCCTTCGGAGAATAGGTGAGGATGGAAGAGTTATACATGAATTTGTTGAACTCGGTGCTAAAGCTAAAGTGGCTGCTACGGAGGCCATGGATGCTGAAGCTATTTTAGGGGAAATACCAGATGAATTCCTGGATCCAATTCAGTACACTCTGATGAAGGATCCAGTTATTTTACCTTCTTCAAGGATCACAGTTGATCGTCCTGTCATTCAGAGGCATCTTCTTAGTGATAGTTCCGACCCTTTCAATCGTTCTCATCTCACCGTCGATATGCTGATTCCTGATGATGAACTCAAGGCGAGAATTGAGGAGTTTGTGAGGTCCCAGCAACTGAAGAAACATGGTCAAGGCCAAAGTGTTCAGAGCAGCAAGGCCACAATTCAGGCCACTAATGCGGAAATGTTGATTGATTAG 3081 0.4232 MAAAKPQRTPQEVEDIIIRKIFLISLTDATGNDPRVVYMELTAAVMLSEGKELRISRDMMEDILMDRLSGSYSSVESPFQYLIGCYQRAHDEGKKIANMKDKSLRGEMESVVREAKKLCVTFCRMDLANPGTFQSGNSSASKQQNSPLLQLILSEVGGTINGFGGSGNAGGIKSPPGFLEEFFRDSHSDLDTILKGLYEELRGSVVKVSALGNFQDSLRALLFLVRFPIGAKSLVYHAWWIPKGVYMHGRAIEMTSIIGPFFHISPLPDYGFFKSQPDVGQQCFSDSSTRRPSDLLSSFTTIKTVMNNLYDGLSELLLILLKSTDYRENVLQYLAEVINRNASRAHIQVDPMTCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDAKYVYHSHRLDLSGLTALQATSEEVAEWIKSNDGAKRLQQSQEATSSGSNNAGGPSNAKLASHAEKTKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDLSRCEDSLSTLKDMQAQSSSPQLELDIARLEKEIELYSQEKLCYEAQILRDNTFIQNALSFYRLMIVWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFASRIPKALDGVVLDEFMNFIIMFMASPEFIKNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTTEWEQRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKHLLKQIVHIYVHLARGDTNNIFPSAISKDGRSYNDQLFSAAADVLRRIGEDGRVIHEFVELGAKAKVAATEAMDAEAILGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSSDPFNRSHLTVDMLIPDDELKARIEEFVRSQQLKKHGQGQSVQSSKATIQATNAEMLID 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3765 1026 PANTHER UBIQUITINATION FACTOR E4 5 1003 IPR045132 GO:0000151|GO:0030433|GO:0034450
Acco02g3765 1026 SMART Ubox_2 931 994 IPR003613 GO:0004842|GO:0016567
Acco02g3765 1026 FunFam Ubiquitin conjugation factor e4 a 927 1005 - -
Acco02g3765 1026 SUPERFAMILY RING/U-box 920 999 - -
Acco02g3765 1026 Coils Coil 506 533 - -
Acco02g3765 1026 MobiDBLite consensus disorder prediction 423 443 - -
Acco02g3765 1026 Pfam Ubiquitin elongating factor core 259 911 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Acco02g3765 1026 CDD RING-Ubox_UBE4A 930 999 - -
Acco02g3765 1026 Pfam U-box domain 928 999 IPR003613 GO:0004842|GO:0016567
Acco02g3765 1026 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 927 1006 IPR013083 -
Acco02g3765 1026 MobiDBLite consensus disorder prediction 423 445 - -
Acco02g3765 1026 ProSiteProfiles U-box domain profile. 927 1001 IPR003613 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3765 1 1026 U-box Gene Family AT5G15400 74.095 0.0 1590