Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3764 ATGTATAGAAATCCTCTCTGGCAGGTCAAATCTGTGCTAGATATGAGACATCATGAGCACTATAAGATATATAATCTATGTATGGAAGAGAATTATGATCCGGAACACTTTTATGGTCGTGTGGAATCATATCCCTTTGATGACAACCATGTACCACCTCTTGACAAGATCAAGAACTTCTGTGAAAGTGTGCATTCGTGGTTATCAAATGACCCAAAAAATATTGCTGTCATTCATTGCATGGCAGGGAAGGGTAGAACTGGCTTGATGGTATCTTCATACCTAGTTTATCGTGGCATGTCGTCAGATGAGGCTCTTCAATTGTATGCTGATAGACGGACAACCAATAACAAAGGAGTATCAATACCAAGCCAACGTCGTTATGTAAGATATCGGGAAAGTGTACTATCTCTTCCTAGAGGCATTGGTAATGAACCAATCAATGTGAGCTTGCCTCAACCTTGTAGCAGAGAGTTGCAGCGAATTCGGCTTTATGATATGCTTAATGTTGAAGAGGTCTATTTTGTGATCTCAGAGATGCAAAAGTGGAGATTATTAGGAGCAACTGCAGACACATTAAGAAAGGATATCAGCAAAACTACAGTCCTTGCTATTATATCTCTTATGCCGAAGCTTACTGGAGATGTTCGTATCACATTCCACCAAAAATGGATGGGAAGCCGACTTTTCTGTTGCTGTTTTAATACATCTTTTATTAGGAATGGCTTGCTACAGCTGAAGATGAAAGACTTGGACAAAGTAGGGAATAAGGGAAGATCAATCTGTGGGCCATCCTTTTGCTTAGAACTTCTGTTTGGACCTGCCAACATGAAATACTCGGAAACTCCACCTAATGATGAGGATTCTGGGGATGAATATCCTTGA 885 0.4023 MYRNPLWQVKSVLDMRHHEHYKIYNLCMEENYDPEHFYGRVESYPFDDNHVPPLDKIKNFCESVHSWLSNDPKNIAVIHCMAGKGRTGLMVSSYLVYRGMSSDEALQLYADRRTTNNKGVSIPSQRRYVRYRESVLSLPRGIGNEPINVSLPQPCSRELQRIRLYDMLNVEEVYFVISEMQKWRLLGATADTLRKDISKTTVLAIISLMPKLTGDVRITFHQKWMGSRLFCCCFNTSFIRNGLLQLKMKDLDKVGNKGRSICGPSFCLELLFGPANMKYSETPPNDEDSGDEYP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3764 294 Pfam Tyrosine phosphatase family 67 111 IPR026893 GO:0004721
Acco02g3764 294 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 288 - -
Acco02g3764 294 ProSiteProfiles Phosphatase tensin-type domain profile. 1 139 IPR029023 -
Acco02g3764 294 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 58 113 IPR000387 GO:0016311|GO:0016791
Acco02g3764 294 ProSitePatterns Tyrosine specific protein phosphatases active site. 78 88 IPR016130 GO:0016311|GO:0016791
Acco02g3764 294 Gene3D - 151 277 - -
Acco02g3764 294 Gene3D Protein tyrosine phosphatase superfamily 1 148 IPR029021 -
Acco02g3764 294 SMART PTEN_C2_2 152 274 IPR014020 -
Acco02g3764 294 ProSiteProfiles C2 tensin-type domain profile. 154 275 IPR014020 -
Acco02g3764 294 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 135 IPR029021 -
Acco02g3764 294 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 274 IPR035892 -
Acco02g3764 294 Pfam C2 domain of PTEN tumour-suppressor protein 171 272 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3764 Acco-ChrAcco02 53134664 53139750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3764 1 289 Protein tyrosine phosphatase (PTP) family AT5G39400 53.666 2.15e-116 339