Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3748 ATGAATGCCGAGGTGACGCATAAATGTGATGTCTATTCTTTTGGATCACTTTTGTTAGATCTCATTTCTGAAAAGGACCCATGCCTTAATTTGACGCTGCATCAGGTTGGTAATATTAAGGAATTACGTAATTTGGCAGGAACAGTAAATGGTGAAGGAATTATTGAGAGTTTGGAGGGAGAAATGGCACCAAAATGTTGGGAATCATATATGGAGATTACAGAGAATTGCCTGAGTGAAGATCCCCATGACAGGCCTCATATGGGGGAAGTTGAAGTGCAACTTGAACGTTTATTGCAACTTCAAGAGGAAGCAGATACCAACCATGCTTCCCATTCTTTCTTCATTTAA 351 0.3989 MNAEVTHKCDVYSFGSLLLDLISEKDPCLNLTLHQVGNIKELRNLAGTVNGEGIIESLEGEMAPKCWESYMEITENCLSEDPHDRPHMGEVEVQLERLLQLQEEADTNHASHSFFI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3748 116 PANTHER OS07G0166700 PROTEIN 4 102 IPR045272 GO:0004714|GO:0006468
Acco02g3748 116 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Acco02g3748 116 Pfam Protein tyrosine and serine/threonine kinase 3 94 IPR001245 GO:0004672|GO:0006468
Acco02g3748 116 SUPERFAMILY Protein kinase-like (PK-like) 2 102 IPR011009 -
Acco02g3748 116 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3748 Acco-ChrAcco02 52940433 52940783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3748 4 103 Receptor kinase-like Gene Family AT1G30570 37.864 1.94e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Acco02g3748 PK_Tyr_Ser-Thr 1.1e-05 CL0016