Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3743 ATGTTGCCGCCAAAGTCTAAAGCAAAGGATGTGAAGCGCAAAGAGTTGGAATCTGTTGAAGGAAGTGTGGGTTCTCGTAAGTGCTTACTTCTCCCTGATGATGTCATGCATAAAAGTGACGTCTATTCTTTTGGAGAACTTTTGGTAGAACTAATATGCCAAAACCCTTCGTTCAATAATGCTGAGGTAACTATTGATGAGAGATTGGTGGGTGAAATGACAGGAGAGTGTTGGGAATTGTATATGGATATTATAGAGAGTTGCTTGCGTAAAGATCCCCAAGAGAGGCCTGACATGGGGGAGGTTGAAGTCCAACTTGAACTTCTTTTGCAACTTCAACAAGAAAGCTGA 351 0.4188 MLPPKSKAKDVKRKELESVEGSVGSRKCLLLPDDVMHKSDVYSFGELLVELICQNPSFNNAEVTIDERLVGEMTGECWELYMDIIESCLRKDPQERPDMGEVEVQLELLLQLQQES 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3743 116 Pfam Protein tyrosine and serine/threonine kinase 35 105 IPR001245 GO:0004672|GO:0006468
Acco02g3743 116 Gene3D Transferase(Phosphotransferase) domain 1 9 116 - -
Acco02g3743 116 SUPERFAMILY Protein kinase-like (PK-like) 37 111 IPR011009 -
Acco02g3743 116 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3743 116 PANTHER OS07G0166700 PROTEIN 19 113 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3743 Acco-ChrAcco02 52810237 52811309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3743 35 114 Receptor kinase-like Gene Family AT1G30570 35.644 3.71e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Acco02g3743 PK_Tyr_Ser-Thr 3.8e-07 CL0016