Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3742 ATGCCGGGGGTGACGCATAAATGTGACGTATATTCTTTTGGAGCACTTTTGTTAGAACTCATTTGTGGAAAGCCCACATACCTCATTTGTGGAAATTGTGAGGGAATTATTGATGAGAGTTTGGTGGGAGAAAAAGCACCACAATGTCAGGAATTATATATGGAGATTACAGAGTTTTGTCTGAGTGAAGATCCCAATGAGAGGCCTGATATGGGAGAAGTTGAAGTCCAACTTGAACATGAACTGCAACTACAGGAGGAAGCAGATACCCACCGTGCTTCTCAGGCGTCCTTGGTGGCTGAAGAGATAATCGAAGATGACACCTTTCCCAGGTAA 336 0.4375 MPGVTHKCDVYSFGALLLELICGKPTYLICGNCEGIIDESLVGEKAPQCQELYMEITEFCLSEDPNERPDMGEVEVQLEHELQLQEEADTHRASQASLVAEEIIEDDTFPR 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3742 111 PANTHER OS07G0166700 PROTEIN 4 85 IPR045272 GO:0004714|GO:0006468
Acco02g3742 111 Gene3D Transferase(Phosphotransferase) domain 1 2 106 - -
Acco02g3742 111 ProSiteProfiles Protein kinase domain profile. 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3742 111 Pfam Protein tyrosine and serine/threonine kinase 4 77 IPR001245 GO:0004672|GO:0006468
Acco02g3742 111 SUPERFAMILY Protein kinase-like (PK-like) 3 78 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3742 Acco-ChrAcco02 52790504 52790937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3742 4 109 Receptor kinase-like Gene Family AT2G23200 34.586 4.10e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Acco02g3742 PK_Tyr_Ser-Thr 3.1e-07 CL0016