Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3694 ATGAGCCTCAGCAGCAGCGCCGTCGCCTTCTCCTTCGGTATCATCTTCCTAGTCTTATCCCTCTGCCTCGCCTGCATCCGCCTCCGCCAGCTCGCCGGCAACCCCGCCATGTTCAATTTGCTCGGCCGTCCTTCCTCCACCGCCGTCGCCGTGGAGCTCCCCGCCATAGCAGAACGTGGCCTCGATGACTCCACCATCAACACCTTCCCAAAGCTCTCCTACTCAGAGATGAAGAAAAGCTCTTATTATAATATTGAAGATCCTTCTAATTCTTCTTCTTGTTCCATTTGTTTAGCAGATTATAAGGAAGATGACATGTTAAGGTTGCTTCCTGATTGTGGTCATCCTTTTCATCTTCTTTGCGTTGACCCTTGGCTCAAGTTACATAACACTTGCCCTATCTGTCGAACTCGAACTTCCTCTTCTTCTGTGAAAACCCCCGACGACGAAGATCAGTCAAATAACTCCGTCGTCAACGACGGGACATAG 489 0.5031 MSLSSSAVAFSFGIIFLVLSLCLACIRLRQLAGNPAMFNLLGRPSSTAVAVELPAIAERGLDDSTINTFPKLSYSEMKKSSYYNIEDPSNSSSCSICLADYKEDDMLRLLPDCGHPFHLLCVDPWLKLHNTCPICRTRTSSSSVKTPDDEDQSNNSVVNDGT 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3694 162 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Acco02g3694 162 FunFam E3 ubiquitin-protein ligase ATL6 50 142 - -
Acco02g3694 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 142 IPR013083 -
Acco02g3694 162 SUPERFAMILY RING/U-box 93 142 - -
Acco02g3694 162 CDD RING-H2_EL5-like 93 136 - -
Acco02g3694 162 Pfam Ring finger domain 93 136 IPR001841 -
Acco02g3694 162 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 150 IPR045899 -
Acco02g3694 162 MobiDBLite consensus disorder prediction 138 162 - -
Acco02g3694 162 SMART ring_2 94 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3694 Acco-ChrAcco02 52181098 52181586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3694 60 147 C3H Transcription Factor Family AT5G06490 55.682 7.66e-28 100