Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3692 ATGAGCTCCAACACATCGGAGTCACATGGCTCTAAGCCTTTGTTTAGCGGATATGCCTATTACTCCATCGGACTAACCAGTGGAATTCTCCTTTTCTTCGCGTTCATTACCGTAATCTTGTACCTATGCTCCCGTAGAATCATCATGAACCCGTCACGGCTGTCGCAAGTTCGCAACGCAAGCTTTGACTTACGGACCATTAGCATCGGAGCTCCTCCGGCGACGAACAGTCCGGTACAGTTAGGTGTGGATGATGAGACCTTGAAGACTTATCCGATGCTTTTATATTCTGAAGTGAAGCGTGATAGGAAAGGCGGTGCCGGTGGTGGTGGTGATTCTGCGGAGGCTACTTGTTCAATATGCTTGGGGGATTTCAGTGAAAGTGAGTGGTTGAGGGAGTTGCCGGATTGCGGTCACTTGTTTCACCGGAAGTGTATCGATATGTGGCTGAGGATGAACTCTTCGTGTCCGTTGTGTCGGACCTCGCCCCTTCCGACGCCGGTTTCAACTCCGCTGGCTGAAGTTGCTCCCTTGGCAAGATCAGGGGCTTGA 552 0.5109 MSSNTSESHGSKPLFSGYAYYSIGLTSGILLFFAFITVILYLCSRRIIMNPSRLSQVRNASFDLRTISIGAPPATNSPVQLGVDDETLKTYPMLLYSEVKRDRKGGAGGGGDSAEATCSICLGDFSESEWLRELPDCGHLFHRKCIDMWLRMNSSCPLCRTSPLPTPVSTPLAEVAPLARSGA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3692 183 SMART ring_2 118 159 IPR001841 -
Acco02g3692 183 SUPERFAMILY RING/U-box 117 165 - -
Acco02g3692 183 CDD RING-H2_EL5-like 118 160 - -
Acco02g3692 183 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Acco02g3692 183 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 174 IPR045899 -
Acco02g3692 183 Pfam Ring finger domain 117 160 IPR001841 -
Acco02g3692 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 164 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3692 Acco-ChrAcco02 52144193 52144744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3692 21 183 C3H Transcription Factor Family AT2G35910 45.181 7.10e-39 130