Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3674 ATGATGGATCAGTGGAGTTTTGAGGAGGAGAAACGGTTTCAAGTTGCTCTGTGGTGTTATCCAGAGGACCACCCCAACCGGTGGGAGAATATCGCGCAAGTAGTTGGCTTCTCCAGGGAGATGGTTTTTCAACGATATCAAAATCTCCAAATTGAATTGGGTTTGGTTCAACCATCGCAATACCTAGACTCTTCTCCCAATCATCAACCACCCACACATAATAGGCGCTCCACATGGGCTTTGGAAGAACATGCACTATTCCTACTAGGAGTGCATAAATATGGCTGGGGAGATTGGAGGAATATTTCTAAATATGCAGTGGTGACACGAGATGCAACTCAAGTGACAAGTCATGCTCAAAAGTTTTCTATTCGCCAGAAAGAAAGAGAAACAAGAGAGCACGCAAAAGCAAGCATACATGATATCACTTTAGCAAACTATGGCCAAGAATATTTAAACCATCTTCTTTCTTCACGCCCTCATTTGGTGCCTCACTCCTGCTCAATAATGCAACAATCTCATCAAGAAGCCTTACCAATTCATCACGATCTCGAGATGAATCAGATATCAACAAATCAAGTAGGCCTAGATCAGATGTTAACACAGATGAATCAAGTAGGCACAGATATTCCTTCATGCGTTCAATTGCAAGATCCACATTATCAACCTAATTCACAAGTTGTGGATCAATCATTGCCTTGGAATCAAGGGGATCAATCTGAGCTACAAATCTTATATGAGGAACTACTCAACCTACTCAATTCCCCATCACCGACTCATCAGTCTGCGCAACAAAATTAG 801 0.4207 MMDQWSFEEEKRFQVALWCYPEDHPNRWENIAQVVGFSREMVFQRYQNLQIELGLVQPSQYLDSSPNHQPPTHNRRSTWALEEHALFLLGVHKYGWGDWRNISKYAVVTRDATQVTSHAQKFSIRQKERETREHAKASIHDITLANYGQEYLNHLLSSRPHLVPHSCSIMQQSHQEALPIHHDLEMNQISTNQVGLDQMLTQMNQVGTDIPSCVQLQDPHYQPNSQVVDQSLPWNQGDQSELQILYEELLNLLNSPSPTHQSAQQN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3674 266 Pfam Myb-like DNA-binding domain 76 121 IPR001005 -
Acco02g3674 266 Gene3D - 77 129 - -
Acco02g3674 266 CDD SANT 78 122 IPR001005 -
Acco02g3674 266 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 4 206 IPR043363 -
Acco02g3674 266 SMART sant 75 125 IPR001005 -
Acco02g3674 266 SMART sant 1 52 IPR001005 -
Acco02g3674 266 CDD SANT 5 49 IPR001005 -
Acco02g3674 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 127 IPR017930 -
Acco02g3674 266 Gene3D - 2 56 - -
Acco02g3674 266 NCBIfam myb-like DNA-binding domain, SHAQKYF class 74 125 IPR006447 GO:0003677
Acco02g3674 266 SUPERFAMILY Homeodomain-like 73 128 IPR009057 -
Acco02g3674 266 SUPERFAMILY Homeodomain-like 3 49 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3674 Acco-ChrAcco02 51821547 51822463 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco02g3674 Myb_DNA-binding 2e-08 CL0123