Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3667 ATGCATGTTATTGTGAATCTGTCCGCCTGGCCTTTAGAGGAACAAGGGCACTTATTCTTCTCTCTTTTTCCCTTTTGGATAAAGACTGGACTCGCAGGCCATATTTTATGGCGGGAAACTAATAAAACTCGCGCATATCTTGAATCGCCGCTTAGCCCCCGGAAGCAACTCGCAATGGGCTCTGAAGCAATCCTTCTCCCAGAATGGGCATACCAGCCTTGCATCATGGGAATCGACGAAGCTGGCCGAGGACCCGTTTTAGGACCCATGGTGTATGGATGCTTGTACTGTGCTCGCTCCTATCAGAAGACCCTCGCAACTTTGAGTTTTGCTGATTCGAAGACACTAAAAGAAGAGAAGAGGGAAGAATTATTTGATAATCTAAAGGGAAATGAATCAATCGGATGGGCAGTTGATGTGTTGTGCCCAAGAGAACTCTCAGCTAAAATGTTGAAGAGGAACAAGATAAACCTGAATGAGATATCTCATCAATCTGCAATGGGCTTGATTGATAGGGTACTGAAGATGGGAGTTCTTCTGACTGAGGTCTATATAGATACAGTTGGAGATCCAGGAAAATATGAAATTATGCTATCAAAAAATTTTCCATCTGTTAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTCTATCCTGTTGTGAGTGGTGCTAGCATAGTTGCAAAGGTCACAAGAGACCGAGCTTTGCGGGAATGGGTGCTTGATGAGACTGCTGAAAACATGCACAGGAACTTTGGGTCAGGATATCCTGGAGACCCCCAAACCAAATCCTGGTTAGAACAACACAAGCATTCTGTCTTTGGATTCCCAACATTGGTCAGATTCAGCTGGGGAACCTGCACTACATATTTTAAAGATATTGTAGAAGTCTTATGGGAATCTGATAAGATGGATGAAGAAGAGGAAGGTGGTAGCAACAGTGGCAAGCGGCAATTGAAATTAAGAAATGTAGGTTTTACCACATCCAAGAGAAAAAGTGAAGAAATAGAATCAAGTGGCAAAGGTCGTAGCAGGTTTTTCCGGACTCGGAAGCTTGAAATTGTTACTGATTTCTGA 1074 0.432 MHVIVNLSAWPLEEQGHLFFSLFPFWIKTGLAGHILWRETNKTRAYLESPLSPRKQLAMGSEAILLPEWAYQPCIMGIDEAGRGPVLGPMVYGCLYCARSYQKTLATLSFADSKTLKEEKREELFDNLKGNESIGWAVDVLCPRELSAKMLKRNKINLNEISHQSAMGLIDRVLKMGVLLTEVYIDTVGDPGKYEIMLSKNFPSVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMHRNFGSGYPGDPQTKSWLEQHKHSVFGFPTLVRFSWGTCTTYFKDIVEVLWESDKMDEEEEGGSNSGKRQLKLRNVGFTTSKRKSEEIESSGKGRSRFFRTRKLEIVTDF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3667 357 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 73 295 IPR024567 GO:0004523
Acco02g3667 357 MobiDBLite consensus disorder prediction 305 341 - -
Acco02g3667 357 FunFam Ribonuclease 54 245 - -
Acco02g3667 357 Pfam Ribonuclease HII 76 286 IPR024567 GO:0004523
Acco02g3667 357 FunFam Ribonuclease 247 293 - -
Acco02g3667 357 Gene3D - 54 245 IPR036397 GO:0003676
Acco02g3667 357 NCBIfam ribonuclease HII 75 288 IPR004649 GO:0004523|GO:0016070
Acco02g3667 357 MobiDBLite consensus disorder prediction 326 341 - -
Acco02g3667 357 CDD RNase_HII_eukaryota_like 76 292 - -
Acco02g3667 357 Gene3D Ribonuclease hii. Domain 2 246 292 IPR023160 GO:0004523
Acco02g3667 357 SUPERFAMILY Ribonuclease H-like 74 291 IPR012337 -
Acco02g3667 357 PANTHER RIBONUCLEASE H2 SUBUNIT A 65 344 IPR001352 GO:0003723|GO:0004523
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3667 59 357 Core DNA Replication Machinery Family AT2G25100 66.221 7.90e-144 406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g3667 02 51749035 51757859 Acco02g3667 02 51749035 51757859 ECH