Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3640 ATGTAATGGCATGCTGTTGCATCATGGACTTGGGATGCTCAGGATGAAACATGTGGGATTTGTAGGATGGCATTTGATGGCTGTTGCCCAGACTGTAAACATCCTGGGGATGAATGCCCTCTGATTTGGGGTGCATGCAATCATGCTTTTCATTTGCACTGTATTCTCAAATGGGTGAATTCTCAAACTTCACAAGCTCATTGCCCAATGTGCCGTCGGGAATGGCAGTTTAAAGAATGA 240 0.45 MXWHAVASWTWDAQDETCGICRMAFDGCCPDCKHPGDECPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKE 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3640 79 CDD RING-H2_APC11 15 77 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Acco02g3640 79 PANTHER RING BOX 2 79 - -
Acco02g3640 79 SUPERFAMILY RING/U-box 2 78 - -
Acco02g3640 79 ProSiteProfiles Zinc finger RING-type profile. 29 72 IPR001841 -
Acco02g3640 79 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 2 79 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Acco02g3640 79 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 79 IPR013083 -
Acco02g3640 79 FunFam Anaphase-promoting complex subunit 11 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3640 Acco-ChrAcco02 51389532 51390952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3640 29 72 C3H Transcription Factor Family AT1G72220 43.478 7.80e-07 42.7