LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco02g3617	ATGGCCAAGGGAGAGGACGCTGTCAGAAAGAAGAAGAACAAAGCGATTCGCAAGAAGCTCCGGAAGCAGAGTGACTCCTCCTCCGTTTCTGCCAGGGTCGCCGCCATCATCGCCGCCAAGAAGCGTCGCCTTTCCGGAAAGCGCCGCATGTGCCAGGGGATGTGCTTTAGCCTGCCTACTTCAGATGATCCATTCAATGATCGACATGGGAAACCAGAATTTAAAAAGAAGCCTTCTAAACGGAAAACCCATTCCCAGAAAGATGTGAGCTCTGATGATGGGAAGAGTGCTGCTGGAACAAAAGACATGCTTGGAGGCCATATTTCCAAATCTAATAAGTTAGGGCAAAATGAGATTACAGATGGGAAGCATGAACATAAAAAATATGTCACAAACACACGTTATCTGGACCAGGAATGTATTAATCTAGAAAGAGCAAATATTGAGGTGATTAAGAAGGGATGCCTTTGTGGTCCCCAGGGAAAAGAATATGAAAACCCTGAGTCCCCTTCAAAGTTTCTAATGTGGTGTTTAAGTTCAATTGGGAATGCATTGTGGCATGATGATGCTTGCACTGATCAAGAGGGAGACTCTTTGCTTTTTGACTCATGGGGATTAGAATTTTGGAAGTGTTATTCTACTGGGAAAGATATAATGGAGACCAGCGGAAATTCTGCTACCACTGAACAAATTGCCTGGATGGTTTCTAGTGCTGCCGATACTATTGCAAGAAAGGAGAAAGAAGGCTTATGCCTTGGCAGTCCCTTTCTTCTATATCTCGTGCCTTCCCAAGAAAAGTCTGTTAAGATCCGCTCAGTCTGCAAGGCTTTGAAGCCTCTTGGCATTCATACAGTGAGTATACATCCGGGCGCCTCCTTAGACCACCAGATTCAAGGTCTGAAATCCTGTGAGCCTGAGTTCCTTGTCTCCACTCCTGAAAGGCTTTTGGAACTTGTTTCTTTGAAGGCTATTGATATATCTAGTGTCTCTATGCTGGTTGTTGATCAGCTGAGCTCTTTCGTTAGTGCTGTTCACCTTGATGCTATAAAATCAATCAAGGATTCTATTTCTGGCACTCCCCGACTTGTGGTTTTCAACGATTGTACCCATTATTCTTCTATCCCAACTGTTCAATATCTTTTGGCAGGATCAATTTGTAGACTATCTCTTAATGATTCAGTTACAAGTCAAAGTTCTTGCATTGTCCAGTCTGTAAAAGTGTGTGCATCTGAAGATGAAAGGCTTCTAGAGAGCATCCAAGCCTTGGATCAGTGCTGGAGTGGCCAGAAGTGTAAACTAGATGTGTTGTATATTGTAAGAAAAGTTGTGAAATCTCAAAAGTTGGTGGCTGCACTCAAATCTAGAGGCTATCCCCTTATAGTTGGATCTGATTCCCAAATATATAATGATAGTGTGGATTCAGATAGCAGAACAAAAGGAGCAGTAGCCTTGATTGATTTGGAGCAGATCTCCACTGCAGATATAGGGAAGTATGATATAGTAATTCTACCCAGTTTTGTACCCTCTGTTGAACGTTACACGCATATTTTAACGAAGATGGCACGCCACAGTATCAATGGTGTCTTGCTCAGTTTCTTAACTAAAGGAGACACAAAACATGTTGGACCACTAATTAAAATTCTAGAGCAGTGTGGGCAGGAAGTGCCTGAAGCATTGAGAAACTTGCATGCTACCCCAGACATGATGGAAGAGTGA	1716	0.4307	MAKGEDAVRKKKNKAIRKKLRKQSDSSSVSARVAAIIAAKKRRLSGKRRMCQGMCFSLPTSDDPFNDRHGKPEFKKKPSKRKTHSQKDVSSDDGKSAAGTKDMLGGHISKSNKLGQNEITDGKHEHKKYVTNTRYLDQECINLERANIEVIKKGCLCGPQGKEYENPESPSKFLMWCLSSIGNALWHDDACTDQEGDSLLFDSWGLEFWKCYSTGKDIMETSGNSATTEQIAWMVSSAADTIARKEKEGLCLGSPFLLYLVPSQEKSVKIRSVCKALKPLGIHTVSIHPGASLDHQIQGLKSCEPEFLVSTPERLLELVSLKAIDISSVSMLVVDQLSSFVSAVHLDAIKSIKDSISGTPRLVVFNDCTHYSSIPTVQYLLAGSICRLSLNDSVTSQSSCIVQSVKVCASEDERLLESIQALDQCWSGQKCKLDVLYIVRKVVKSQKLVAALKSRGYPLIVGSDSQIYNDSVDSDSRTKGAVALIDLEQISTADIGKYDIVILPSFVPSVERYTHILTKMARHSINGVLLSFLTKGDTKHVGPLIKILEQCGQEVPEALRNLHATPDMMEE	571

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco02g3617	571	Gene3D	-	251	384	IPR027417	-
	Acco02g3617	571	MobiDBLite	consensus disorder prediction	57	120	-	-
	Acco02g3617	571	PANTHER	DEAD-BOX ATP-DEPENDENT RNA HELICASE 50	13	538	-	-
	Acco02g3617	571	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	252	352	IPR027417	-
	Acco02g3617	571	MobiDBLite	consensus disorder prediction	1	32	-	-
	Acco02g3617	571	Pfam	DEAD/DEAH box helicase	249	356	IPR011545	GO:0003676\|GO:0005524
	Acco02g3617	571	Gene3D	-	390	565	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco02g3617	Acco-ChrAcco02	51025883	51032339	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco02g3617	258	562	Eukaryotic Initiation Factors Gene Family	AT1G72730	21.429	3.19e-06	47.8