Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3608 ATGTTGGCTATGGAGAAGGATTTTGATTCTAAGTTGAAAATTCTGGAGAATTCATCTGCTGCTGGGAATGTACAGAGATCTAAGAGCTTTGCCTTCAGAGCCCCTCAGGAGAATTTCTCCATACAGGACTTTGAATTGGGAAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAGTTGTGTATGCATTGAAAATCATGGATAAAAAATTTATTACTAAAGAGAACAAAACAGCTTATGTGAAGCTGGAGCGCATAGTGCTTGATCAGTTGGACCATCCTGGCATTGTGCGCCTATTTTTCACATTTCAAGACTCATTTTCCATTTACATGGCACTTGAGTCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCCGGAAGGGTCGTCTATCTGAGGATGAAGCGCGGTTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATATATACATAGTTTGGGATTGATACATCGTGATATAAAGCCAGAGAACTTGTTACTTACAGCTGAAGGACATATTAAAATAGCCGACTTTGGGAGTGTGAAGCCTATGCAGGACAGCCGCATTACAGTCCTTCCAAATGCGGCAGCATCAGATGATAAAGCCTGCACTTTTGTGGGGACAGCTGCTTATGTCCCTCCTGAGGTTCTTAATTCTTCCCCAGCAACTTTTGGGAATGACCTCTGGGCTCTGGGTTGTACATTATATCAAATGCTTTCTGGAACTTCTCCATTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATCATAGCCAGAGATCTTCGATTTCCAGATTACTTTTCTGAGGAAGCAATTGATCTTATTGACCGTTTACTGGATTTAAATCCAACAAGGAGGCCAGGTGCTGGACCTGATGGTTATGCTGTTTTGAAAATGCATCATTTTTTCAAGGGAGTAGACTGGAAAAACATAAGGGATCAGAAGCCACCAAAACTTGCTCCAGAAGCAGGGGGAGTAGACTGGAAAAACATAAGGGATCAAAATCCATCAAAACTAGCTCCAGAAGCAGGGGATGGTTATGCTAAACCTGATGGAAATGCCAGTGCTACTTCTTCTGATGGGAATGCTCATGTGACCAGGCTAGCTTCAATCGATTCTTTCGATTCAAAATGGCAACAATTTTTGGAACCTGGGGAATCTGTACTTATGATCTCAAATGTAAAGAAATTACAGAAACTAACTAGCAAGAAGGTGCAGCTAATCCTTACAAACAAGCCAAAGTTGATCTACGTAGACCCATCTAAACTAATTGCAAAAGGAACTATGTTATGGTCTGATAATCCAAGTGAACTTTCTGTCCAAGTGACTAGTCCTTCACATTTTAAGATTTGCACACCAAAGAAAGTAATGTCATTGGAGGATGCAAAACAAAGAGCAGGGCAGTGGAAGAAGGCAATTGAAGGGCTTCAAAACCGATGA 1467 0.4124 MLAMEKDFDSKLKILENSSAAGNVQRSKSFAFRAPQENFSIQDFELGKIYGVGSYSKVVRAKKKDTGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDSFSIYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSRITVLPNAAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDLRFPDYFSEEAIDLIDRLLDLNPTRRPGAGPDGYAVLKMHHFFKGVDWKNIRDQKPPKLAPEAGGVDWKNIRDQNPSKLAPEAGDGYAKPDGNASATSSDGNAHVTRLASIDSFDSKWQQFLEPGESVLMISNVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIAKGTMLWSDNPSELSVQVTSPSHFKICTPKKVMSLEDAKQRAGQWKKAIEGLQNR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3608 488 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Acco02g3608 488 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Acco02g3608 488 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3608 488 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Acco02g3608 488 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Acco02g3608 488 SUPERFAMILY PH domain-like 306 487 - -
Acco02g3608 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Acco02g3608 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 331 - -
Acco02g3608 488 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3608 488 Pfam Protein kinase domain 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3608 488 Gene3D - 360 488 IPR011993 -
Acco02g3608 488 Pfam PH domain 385 487 IPR033931 -
Acco02g3608 488 SUPERFAMILY Protein kinase-like (PK-like) 29 327 IPR011009 -
Acco02g3608 488 Gene3D Transferase(Phosphotransferase) domain 1 128 330 - -
Acco02g3608 488 FunFam 3-phosphoinositide-dependent protein kinase 1 359 488 - -
Acco02g3608 488 Coils Coil 468 488 - -
Acco02g3608 488 MobiDBLite consensus disorder prediction 322 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3608 Acco-ChrAcco02 50913358 50919536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3608 1 488 AGC Kinase Gene Family AT3G10540 78.732 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Acco02g3608 Pkinase 1.3e-64 CL0016