Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3602 ATGACTTCAATGTCTCTCTCACAAGCAGAAGCTTTTTCAACTAAAAATCCATTTGACGGTTTCATTGATATGACACAAGCTTCTTCCACTTATCGTCTTTGCTTACATTTATTCTGCGAATTTCCCCATTTCTTCTCACTCATGAACTGTCTTCGGCTTCTTCCCTTATCCTCTGGTTTGCCTTTCCAAAGCTTTAGAAGCCACCATAGGAAGCCTCTTTGCTCTGCCAGTTCATTGGGAATGTCAAATACTTGTGATCCAAATCGAAGTATAGCAGTGAAGTCAGCTTCTGGCTCCATGTCCAGTGCGGGGACAAATAGTGCTGATGTTAGGGAAGAGGAAAAATCTGAGACATATAGTCATAATATGACTGAAGCCATGGGTGCTGTTTTGACTTATAGGCACGAACTGGGGATGAACTACAACTTCATTCGTCCAGATTTAATTGTAGGATCATGCCTGCAGACTCCTGAAGATGTTGACAAGCTTCGTGCGGTAGGAGTGAAAACTATATTTTGCTTGCAACAAGACCCAGATCTAGAATACTTTGGTGTTGATATCAAGGGCATTCAAGAATATGCTGGGTCTTGCGATGGCGTTCAACACTTGAGGGCTGAGATAAGGGACTTTGATGCATTTGACTTAAGGATGAGGCTTCCGACTGTAGTTAGCAAATTGTACAAGGCCATAAATTGCAATGGGGGTGTGACATATATACATTGCACTGCTGGACTTGGGAGAGCACCAGCTGTTGCGTTGGCTTATATGTTTTGGGTTCAGGGCTATAAACTTAATGAGGCTTATAGATTGCTTCTGAGCAAAAGATCATGCTTCCCAAAGTTGGATGCAATAAAAAGTGCAACAGCTGATATTCTTACAGACCTCAGAAAAAAGCTTGTCACATTGACGTGGGGAGGCGACAATTGCTCAACAGTTGAAATTTCTGGACTTGATATTGGATGGGGCCAGAGAATACCCCTGCGTTATGATGACAAACAGGGTCTGTGGGTTCTCAAGAGGGAATTACCTGTAGGACACTACGAGTACAAGTACATTGTTGATGGGGAATGGATTTGCAATCAGTATGAGCTTGTGACCTCTCCCAACAAAGATGGCCATGTCAATAATTATCTGCAAGTCATTGACGATGTAGACGTTGCCGATGCCTCCTTAAGGAAGAGGTTGATGGGTGATGATCCTGATCTCACAAAGGATGAACGGCTGAGAACAAGACAGCTTCTTGAAGCTCTTCCTGATGAAGAACCATGA 1269 0.431 MTSMSLSQAEAFSTKNPFDGFIDMTQASSTYRLCLHLFCEFPHFFSLMNCLRLLPLSSGLPFQSFRSHHRKPLCSASSLGMSNTCDPNRSIAVKSASGSMSSAGTNSADVREEEKSETYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRAVGVKTIFCLQQDPDLEYFGVDIKGIQEYAGSCDGVQHLRAEIRDFDAFDLRMRLPTVVSKLYKAINCNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEAYRLLLSKRSCFPKLDAIKSATADILTDLRKKLVTLTWGGDNCSTVEISGLDIGWGQRIPLRYDDKQGLWVLKRELPVGHYEYKYIVDGEWICNQYELVTSPNKDGHVNNYLQVIDDVDVADASLRKRLMGDDPDLTKDERLRTRQLLEALPDEEP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3602 422 Pfam Glycogen recognition site of AMP-activated protein kinase 300 383 IPR032640 -
Acco02g3602 422 MobiDBLite consensus disorder prediction 96 119 - -
Acco02g3602 422 Gene3D Immunoglobulins 295 385 IPR013783 -
Acco02g3602 422 CDD E_set_AMPKbeta_like_N 300 380 - -
Acco02g3602 422 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 217 275 IPR000387 GO:0016311|GO:0016791
Acco02g3602 422 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 133 315 - -
Acco02g3602 422 Gene3D Protein tyrosine phosphatase superfamily 133 412 IPR029021 -
Acco02g3602 422 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 69 420 - -
Acco02g3602 422 CDD DSP_laforin-like 139 286 IPR045204 GO:0019203
Acco02g3602 422 ProSiteProfiles Dual specificity protein phosphatase domain profile. 140 297 IPR020422 GO:0006470|GO:0008138
Acco02g3602 422 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 137 282 IPR029021 -
Acco02g3602 422 SMART dsp_5 140 298 IPR020422 GO:0006470|GO:0008138
Acco02g3602 422 Pfam Dual specificity phosphatase, catalytic domain 199 278 IPR000340 GO:0008138|GO:0016311
Acco02g3602 422 SUPERFAMILY E set domains 298 380 IPR014756 -
Acco02g3602 422 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 295 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3602 Acco-ChrAcco02 50809158 50821058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3602 139 421 Protein tyrosine phosphatase (PTP) family AT3G52180 68.905 4.74e-146 415