Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3582 ATGGGTCGTGATTCTGCGACTTCTCTCGCCCCCGGATTCCGATTCCACCCCACCGACGAAGAACTCGTTCGCTACTACCTAAGGCGCAAGTTGTGCGGCAAACCCTTCCAGTTCAACCCAATTGCCGTCATCGACATCTATAAATCCGAACCCTGGGACCTCCCCTGTCATTCGAAGCTGAAAAGTAGGGACTTGGAATGGTACTTCTTCAGTGGGCTGGACAAGAAGTACGGGAATGGATCGAAGACAAATCGAGCTACGGAGAAAGGTTACTGGAAGACTACGGGGAAGGATCGCCCTGTGCGACACAAATCGCGAATTGTCGGAATGAAGAAGACCCTTGTTTATCATAATGGTCGAGCGCCGCGCGGTGATCGTACCAATTGGGTGATGCATGAGTACAGAATGACCGATGATGAATTGGTGAAAGCAGGAATAGCTCAGGATGCTTTTGTGCTCTGTAGGGTTTTCCAGAAGAGCGGTACTGGGCCAAAGAATGGTGAGCAGTACGGTGCCCCCTTTATAGAGGAGGAATGGGAAGAGGATGAGGTGGCTCCGGTGTCAGGTGAACGGGCTATTACTGGTGAAGTTCTAATGGGTGATGATGTAGATGCTTTTATTGAAACAAACGACCTTGAGCAGCACCTTGGTACGGACATAGCATCTGCTATCGCTGCAATTCCTCTTGGCATGTGTTGTGGAGAGAGTAGTAGCTATCCTGAACCTGAGCATTCCCGGGTAACTGCTGAAGAACAGAAGCCTTTGGCAACCACTGGTGGAATTTGTGAGCCTCAAGGGGATCGGTTCCTGAATATACCTGAGCAGTATGCGGTGGATGGTAAAACATTGAAGGATGAATATGAAGTGGAAGCAAGGCATGATGGAAGTCCTCTTAATGTCGATCATCCATTTGATGAACTATGCTTGGATGCTCTTGATTTTCCTCAGATTGGTGATGGTTCATTTCTGGAAACCAATGATCTTTTAAATCCAATTGAGGCGGATTTTGATGTTAAGGACATGCTGGATGAGTATCTTAACTACTTTGATGCTGATGATGATATTTCCAAATTTATATCTTTTGAGGATCCTCAAATAAAGAGCGATGCAGAAGTGGTTCCTGACCAAGGACTGCCTTTCATTCAGAATGTGGATGAGGAACCCAGCATGGCTTGTAAGCAGAATTTTGATGAAGCACCTTGCGGAGATGGAGCTTCCTCTTCTAAGAAGAATCCAGAATTGTCAAAATCGGTACCAGGAGATATGAGTCCGTTGACAAAAAGAGTCAGTCGCTTGTTGGATGGCATCCCTGCTCCTCCTGCATTTGCTTCAGAATTTCCTCCCAAAGACATTGCTCTTCGGCTTCATTCTGCTGCTCAATCTTCCAATCATGTAACTGCAGGTATGATTAGAGTAACTAACATTACCCTTAGAGGTAATGGGATGGACTGGACGCCGGGCAAGAATGGAGGGTTCGACTTTGTGATCTCTTCTGATTACTCTCAACCTAATAATATTTCTGATGCGTTGGTCCCGGTGTCTGGGTTGCTGTCTGGCAAGAGTGCCTTTTTGGTGTCACATTGCTGGATTTTCTTGATGCTCTTTTCGGTTCTTATACTTTCACTGAGTTGCAAGATTGGGAGTTGCATGTATGCTGCTGGTAAATGA 1668 0.464 MGRDSATSLAPGFRFHPTDEELVRYYLRRKLCGKPFQFNPIAVIDIYKSEPWDLPCHSKLKSRDLEWYFFSGLDKKYGNGSKTNRATEKGYWKTTGKDRPVRHKSRIVGMKKTLVYHNGRAPRGDRTNWVMHEYRMTDDELVKAGIAQDAFVLCRVFQKSGTGPKNGEQYGAPFIEEEWEEDEVAPVSGERAITGEVLMGDDVDAFIETNDLEQHLGTDIASAIAAIPLGMCCGESSSYPEPEHSRVTAEEQKPLATTGGICEPQGDRFLNIPEQYAVDGKTLKDEYEVEARHDGSPLNVDHPFDELCLDALDFPQIGDGSFLETNDLLNPIEADFDVKDMLDEYLNYFDADDDISKFISFEDPQIKSDAEVVPDQGLPFIQNVDEEPSMACKQNFDEAPCGDGASSSKKNPELSKSVPGDMSPLTKRVSRLLDGIPAPPAFASEFPPKDIALRLHSAAQSSNHVTAGMIRVTNITLRGNGMDWTPGKNGGFDFVISSDYSQPNNISDALVPVSGLLSGKSAFLVSHCWIFLMLFSVLILSLSCKIGSCMYAAGK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3582 555 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Acco02g3582 555 MobiDBLite consensus disorder prediction 394 423 - -
Acco02g3582 555 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Acco02g3582 555 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Acco02g3582 555 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 187 - -
Acco02g3582 555 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Acco02g3582 555 FunFam Nac domain-containing protein 86 18 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3582 Acco-ChrAcco02 50568297 50571157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3582 1 542 NAC Transcription Factor Family AT5G04410 43.814 1.97e-146 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g3582 NAM 6.2e-36 No_clan