Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3581 ATGACATTGATGTCGAAGCTAGAGTCCAGAGTTGAGGAGGAGGAAGAGGTGGATGATGAGGATGGTGAGGAGGAACCAATAGCAGAATCTGCGGAGGCTACGATGGTGGTGGGGTTGGGGACGGTAGGTAGGTCTGGTGGCGCCGTACCCCTTTTGTTGCTTGACCCTCAATCAAAGACCCATCTTTTCCGTTTTGCTTCGGCAACTCCACCACCAAAAGCCCTAATCTCCATACCCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATCTCTACCATCTTATGGGTCGCGAGACTTTAGCACTTCCAGCTCCACCGGCCCCAGTAGTCACAGTACCGAATCCAACATCACCACAAGTAGTAGCACCACAAGCTCCTCCTACATCACTTGCTCCTGGCTTTCGCTTTCACCCAACTGACGAGGAGCTCGTTATTTACTACCTTAAGCGCAAAGTTCGTGGAAAAACTTTCCGATTTGATGCAATCTCAGAGGTCGACATTTACAGAAGCGAACCTTGGGACCTAGCAGATAAGTCGAGGTTAAAGACAAGGGACCAAGAATGGTATTTTTTTAGTGCATTGGATAAGAAATACGGTAATGGAGGGAGAATGAACAGGGCAACGAGCAGAGGATACTGGAAAGCCACTGGGAATGACCGTCCAGTGAGGCATGAACAAAGGACCGTAGGGCTGAAGAAAACTTTGGTATTTCATAGTGGAAGGGCTCCAGATGGTAAGCGTACAAACTGGGTAATGCATGAGTACAGGCTTGTTGAAGAAGAACTGGAAAGAGCCGGAATTGGGTCGGCCCAGGATGCATACGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATGATTCATCGGCACTGATTCCTGGGGTAGAGCCTGTAAATGAAGCTACAGCTGTCCGTCGCCCACTCATCGAAGGCAATGGCCATGTTGGCTGTTTTGAAAGAACTAATGCTGTCCAGGATACTCACTCCATCAATAAAGTTCCTCTTGATGTGAACAAGCTACCAATCGAAACTCAAAATCTTCTAGCTGTCTGCAAGAGGGAAAGCATGACTGAGTTTCCGTCACCTGAGAGGGATAATTCTAAGTCTATGGATGAGTACCCATCACCACAAACAGACAATCCGAAGCCATTCTCGTTAATATACAAAAGAAGGCGGCATAGCTTAAATTCTAGTCATTCAAATGTTCCTGAGCATTCGGTTCATAACGGCCAGGATCGATGCTCATCAATAATAACCACTGCTGCAACAACACTCCCGACCACAACCACCACCACAACTGCCAGCACTTCGTCGAGAAAACATTTTCTGTCTGCACTGGTGGAGTTTTCCCTACTCGAATCTCTTGAACCTAAGGAAAGTCCTTCGACCCTGGTGCCGAAATTTGACCCCTCATCTCTTGACTCCCCTCTGCCCCCAAACTGCCTGAAGTTCATCCAGCAGTTGCAGGATGATGTCCACAAGCTCTCGGTAGAAAGGGAGACAATGAAGTTCGAGATGATGAGCGCGCAAGCCATGATAAACATTCTGCAATCGCGCATCGACATGCTGACCAAAGAGAACAAGGAGTTGAAGAGAGGCACTGGGGTTGATGCTTAG 1671 0.4734 MTLMSKLESRVEEEEEVDDEDGEEEPIAESAEATMVVGLGTVGRSGGAVPLLLLDPQSKTHLFRFASATPPPKALISIPTFFFFFFFFFFFNLYHLMGRETLALPAPPAPVVTVPNPTSPQVVAPQAPPTSLAPGFRFHPTDEELVIYYLKRKVRGKTFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSRGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVEEELERAGIGSAQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDSSALIPGVEPVNEATAVRRPLIEGNGHVGCFERTNAVQDTHSINKVPLDVNKLPIETQNLLAVCKRESMTEFPSPERDNSKSMDEYPSPQTDNPKPFSLIYKRRRHSLNSSHSNVPEHSVHNGQDRCSSIITTAATTLPTTTTTTTASTSSRKHFLSALVEFSLLESLEPKESPSTLVPKFDPSSLDSPLPPNCLKFIQQLQDDVHKLSVERETMKFEMMSAQAMINILQSRIDMLTKENKELKRGTGVDA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3581 556 Pfam No apical meristem (NAM) protein 134 259 IPR003441 GO:0003677|GO:0006355
Acco02g3581 556 FunFam Nac domain-containing protein 86 141 287 - -
Acco02g3581 556 Gene3D NAC domain 141 287 IPR036093 GO:0003677|GO:0006355
Acco02g3581 556 MobiDBLite consensus disorder prediction 371 402 - -
Acco02g3581 556 MobiDBLite consensus disorder prediction 1 28 - -
Acco02g3581 556 MobiDBLite consensus disorder prediction 12 28 - -
Acco02g3581 556 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 131 410 - -
Acco02g3581 556 SUPERFAMILY NAC domain 127 285 IPR036093 GO:0003677|GO:0006355
Acco02g3581 556 Coils Coil 503 551 - -
Acco02g3581 556 ProSiteProfiles NAC domain profile. 132 284 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3581 Acco-ChrAcco02 50543431 50550996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3581 97 550 NAC Transcription Factor Family AT3G10480 43.486 3.26e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g3581 NAM 4.6e-36 No_clan