Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3574 ATGCGAATGAGACTGCTCCACAATTGGGATAAACTCATAATAGTTTCCATGTCTTTCAGAGTGGTTTTGTGGTCGCAACACCTAGAATTTGGGGCATTGAAGAGGAACATACGGAAGGAAGCAAAGGAAGGAAGGAAGCAAGCAAGCATTACAGAAGGAACAGATAAAGGGACACATAATATAATTAAACCCCACAAATCTGCCGTCATTATTATTGTTCCTTCAAGAATGCTTCCTCCTAGTACCTGCATTCTCTTCTTATGCATCTTCTTGTGTTCTTTCTCTCCTTCCATTAAAGCTTCCTTCAACCTCTCCTTGTCCCACCAGCATCCTTACCCTGAAGCTGTGGTTCATGAAGTTCACAGAAGAGTCAATGTATCTCTTTCCCGGCGGGAACTACTCGCCGGCTCCGGAAAGGACCTCAGTAATGGCTGTCTCACCGGGAATCCAGTGGACGACTGCTGGCGTTGCGACCCGAACTGGGCGGCAAACCGGCAGAGGCTAGCGGACTGCGGCATTGGGTTCGGTCGCGACGCCATGGGTGGAAAAGGCGGCCTGATCTACGTCGTCACAGATTCATCCGACAACGACCCGGCAAATCCAATTCCGGGAACTCTCCGTTTCGGATGGGAGATGTACGCCATCGGCGGCAGCGCAAACCCTACCATCAACAGCCAGGGTAACCGTTACACTGCGCCGCCTAATCCTGATACTAAAGAGGTGACGAAGCGGGTGGACACAGACGAGGGGGAGTGGGCGGATTGGAACTGGAGGACGGAGGGTGACGTCATGGTCAACGGCGCCTTCTTCGTGCCGTCCGGTGGCGGCCTCAGCGCTCAGTACGCCAGAGCCGCCAGCATCGACCCCAAGTCTGCCGTCCAGATCGACCAGCTCACCCTCAACGCCGGCGTCTTCGGCGATCCCAGGGATAATGGAGATCTGTATCCCGGGTTCAGCGGCGGTGGGACCGTAACCGGAGCCACCAGCACCGGCAACGCGGGGTCCAGCGGCGGAGGCGGCGATGGTGACTTCTTTGGAATGATATTCAGGGGTAGTAGCAGCGAAGCGGCGCCACCCTCACGCTCCTTTGTTTCGATCTTTTTGTCTCTTCTCATTATTTCCATTTTGTACACTTTCACCAGCCACCATGCTTTCCTATTCTCTTCCATACTTTGA 1176 0.5383 MRMRLLHNWDKLIIVSMSFRVVLWSQHLEFGALKRNIRKEAKEGRKQASITEGTDKGTHNIIKPHKSAVIIIVPSRMLPPSTCILFLCIFLCSFSPSIKASFNLSLSHQHPYPEAVVHEVHRRVNVSLSRRELLAGSGKDLSNGCLTGNPVDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGLIYVVTDSSDNDPANPIPGTLRFGWEMYAIGGSANPTINSQGNRYTAPPNPDTKEVTKRVDTDEGEWADWNWRTEGDVMVNGAFFVPSGGGLSAQYARAASIDPKSAVQIDQLTLNAGVFGDPRDNGDLYPGFSGGGTVTGATSTGNAGSSGGGGDGDFFGMIFRGSSSEAAPPSRSFVSIFLSLLIISILYTFTSHHAFLFSSIL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3574 391 Gene3D - 148 208 IPR012334 -
Acco02g3574 391 Gene3D - 209 306 IPR012334 -
Acco02g3574 391 MobiDBLite consensus disorder prediction 224 247 - -
Acco02g3574 391 PANTHER PECTATE LYASE 18-RELATED 210 305 IPR045032 GO:0030570
Acco02g3574 391 PRINTS Pollen allergen Amb family signature 195 220 IPR018082 -
Acco02g3574 391 PRINTS Pollen allergen Amb family signature 171 188 IPR018082 -
Acco02g3574 391 SUPERFAMILY Pectin lyase-like 208 304 IPR011050 -
Acco02g3574 391 SUPERFAMILY Pectin lyase-like 149 207 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3574 Acco-ChrAcco02 50398274 50406179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3574 210 311 Polysaccharide Lyase AT3G54920 70.874 2.90e-45 161