Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3564 ATGAGGCTTTCTTTGTCGATCTTCTTCTCTTCGCTTCTTGGGTTTCTGTTCGTCTTTTCAACGTCGTCGGCTGCGAAGTTACTCAATGATCTTCGCCAGGTACCGTCGATTCAGGCCAAGAAACTCATCAGACAGCTCAATTTATTCCCTGTTGCGGATGTCAACATCGTGCGCGGACTTGGGTCACCATGCTGGCTAGCTATTACACGATTGAGCATTCTCATGCTGCTAAGTATATATTCTCATTCTCATGCTCCTTCCTCCTTCACTTCTCCCCAAAACGTAAGAAGTTCAGAGGAAAACATATCTGAGTTTCCTCTCGCCATCGAGATCTGTGACCCAAACCTATTACAATGGATCTGGCTTGGAACCTTCGACATGGCGGAAGAAGCCTCGTCTGAGTACGACTGGGCAGCTCTAAAGATCAAGGGTCCTGACGTTGTCACCAACTTCCCATGCTCCTTCATTATGGAGGACACAACGACGTTGGAAGCCATCGAGGATGAAAGCCCCAACGCTAAAGGAACAGTTTCGTTGTAG 540 0.4778 MRLSLSIFFSSLLGFLFVFSTSSAAKLLNDLRQVPSIQAKKLIRQLNLFPVADVNIVRGLGSPCWLAITRLSILMLLSIYSHSHAPSSFTSPQNVRSSEENISEFPLAIEICDPNLLQWIWLGTFDMAEEASSEYDWAALKIKGPDVVTNFPCSFIMEDTTTLEAIEDESPNAKGTVSL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3564 179 Gene3D AP2/ERF domain 103 154 IPR036955 GO:0003700|GO:0006355
Acco02g3564 179 ProSiteProfiles AP2/ERF domain profile. 91 152 IPR001471 GO:0003700|GO:0006355
Acco02g3564 179 SMART rav1_2 110 158 IPR001471 GO:0003700|GO:0006355
Acco02g3564 179 CDD AP2 110 152 IPR001471 GO:0003700|GO:0006355
Acco02g3564 179 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 110 161 - -
Acco02g3564 179 SUPERFAMILY DNA-binding domain 118 154 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3564 Acco-ChrAcco02 50252156 50252787 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3564 35 151 AP2-EREBP Transcription Factor Family AT5G53290 32.283 3.46e-11 58.9