Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3555 ATGGAGTTAGAAGTTAAGTTGGTAGGTGGCATAGACAACTGCTTCGTATCCCTTCCTCTTCCTCTTATCCAACTTCTGCATTCGACGCGCTCAACCCAACTCCCTAATATTCTCATTCTCGAGCTTCGCTCTCGCTCTGGCGATCTCTGGGTCGTTGCTTGGTCTGGAGCTACTTCTGCTTCTAATGCCATAGAGGTTGCCCAACATTTTGCAGAATGCATTTCCTTGCCAGATCATGCTAGAGTTCAAGTAAAAGCTGCTTCTAACGTGTCACATGCTTCTCTAATTACAATAGAACCCCATTCAGAAGATGATTGGGAAATTTTGGAGCTGAACTCTGAGCAAGCTGAGGCAGCAATTTTAAACCAGGTCAGGATTGTCTATGAAGGAATGAGATTTCCTTTGTGGTTGCATGGTCGCACAATGATTACCTTCATTGTTGTCTCTGTTTTTCCCAAGAAAGCGGTGGTGCAACTCATGCCAGGAACTGAGGTTTCAGTTGCCCCTAAAACACGTATAAGGTTTTCAAATTCAATTGCAGACTTGGATCCAGATTCATATGATAGAGAACACACTCCAAAGATGCTACTCCGTATACAGGATCCAGATAGGTCGTGTCACACAAGTGCCTGTGTCAAAGGAGTCGATCTTCATATGGAGCTTACTTCTGCCGCTTTTGTTAATCCAGAAACAAGCAAACGGTTGTCACTCAATAGGCTTCAATTGGTCTCCATAGTTCCAAGATTATCCAACAAGGCTAATGGTACTTCCAGAACGAATATTATGAAAACAAAAGGCAGTTCAACTACTAGGGGAGTTGACTTTGGAAATTTAACTGATGAGAAAGGGTGTCAACAAGCAATTGTTTATCTTCTCCTTTCAGAGTCAGTGGCCAAGGGACATGTGATGGTTGCTAAATCTCTTCGTCAGTATTTAAGAGTTGGTCTGCATTCATGGGTCTATTTGAAGGCATGTGATGTTAATTTGGAAAAAGCTATTCCCTCCTTCTCGCTATCTCCTTGCCATTTCAGAATGTTGAGCCAGGATAATGATGGTGATAATATTATAGATAAGAACAAGCTCACAAGGACTGCATCAGGTGTCTTTGGGGATTTTGCGGATTGGTCTATCCATAATGGAGTTATGAATGTTTTTTCAGATGAATCCCATTCTGAAGAAGATGAAGAGGTTGCAAATCAATCTGAGAATCAAAACGGACTGCAGCATCTTTTAAGAGTATGGTATATCGCACAACTTGATGCAGTTGCTTCCTTTACTGGTATGGAGGTTAATGCACTGGTATTGGGCTCTAAAACCTTACTTCATTTTGAAGTGAGTTACATAAAGCTTGGACCTAAAGGAAAGGTTCAGTTAGCTTCTAATTCATTAGAAAACAGAAGTAAGACTGCTGAAATATTGTTTTTATTGACTATTGGAGAAGATTCTTTGCATCATGAAAAAATTACTGCATATGAAATTGCACTTGATGAAAGAAACAAAATGAACAGTAGTCCAGCAGATCAACAGCTGTTTAAAAGGCTGAAGTTCACTGATCCCATCTCTATCCAATCTCTAGAAGATAAAATATCTGAAGAACATATTACTTCAGAAGTAACTAGCCTTGAGTGGATGAAGGAAGCTGCTTCTGATGTTATCAATAGTAGTCACAGATCCGACTCTGTTAGTGATGTTGCCTCTCATCGTGCCACTACTGTCTCTTCACGAGAATGTCTAAGCTTCATTGAGCTGCTATTGTCTCTTCGCCAAAATTGTTGTTTGGCGATTCTCATAGATTTGGCTCGACGCATCAATGAAGAGAGTCTATGCTTCAAGAAAACTGATAGGCGGAATGTTGAGTTGTTCACAAATGTGGATTGGGCAGACTTTGTACCTTTGGTGAGATGGATCGACGACGATGATGCTGAGAAACCTAGACGAGGAGGGATGAGAAATTTGTTATCTTCTGCCTCTGGTATGCCACTCCCAGGACATGTTCTTATATATGGACCTTCAGGCTCTGGCAAAACTTTACTAGCAAGGACTGCTGCAAAATACTTTGAGAAACATGAAGACATCTTAGCACACATAATTTCTGTTTCTTGTTCAAAACTAGCTTTGGAGAATGTCCCAATAATCCGGAAAGAAGTTACTGACAACATTATCGAAGCTTTAGATCATGCTCCTTCTATTGTCATCTTTGACGATCTTGATAGCATAATTTCCACCTCTGACTCAGAAGGGACCCAACCTTCAACAACTGCTGCTGGACTCGCAGATTTTCTGGTTGACGTTATTGATGAATGCGGGGAGAAAATACGGAAATCATGTGGATTTGGACCAATAGCCTTCATAACTTCTGTGCAAGCTCTCGAGAAGATACCACAGACTTTAAGCTCTTCAGGGAGGTTTGACTTTCACATACAGCTGCCAACTCCTGCAGCTTCAGAGCGGGGGGCTATGTTGAAGCATGAAATAAAAAGGCGTCACTTGCAATGTGCTGATGACATCCTGCTTGATGTAGCTGTCAAATGTGATGGCTATGATGGTTATGATCTGGAAATATTGGTTGATAGAGCTGTCCACGCTGCTGTATCCCGCTTTCTCCCATCAAATGCTGCTCTTAATGAGCATGAGAGTCCTGCTTTACTTATGGAAGATTTCTCTCAGGCAATGCATGATTTTCTTCCAGTGGCAATGCGAGACATTACAAAAGCTGCTTCTGATGGTGGGCGCTCTGGATGGGATGATGTGGGAGGTCTTGTTGACATTCAAAACACTATTAAGGAGATGATAGAGATGCCTTCTAAGTTTCCGAAAACTTTTGCGCAAGCTCCTTTGAGGTTAAGATCAAATGTCCTTTTATATGGGCCTCCCGGCTGTGGCAAAACTCACATAGTTGGTGCTGCTGCCGCTGCTTGTTCTCTACGTTTCATATCTGTGAAAGGGCCAGAACTGTTGAACAAATACATTGGTGCTTCTGAACAAGCTGTTAGGGATATTTTCTCTAAAGCAGCTGCAGCAGCACCATGTCTACTCTTTTTTGATGAATTTGATTCTATTGCCCCCAAGAGAGGACATGACAATACTGGAGTCACTGATCGTGTTGTGAATCAGTTTCTGACCGAGTTAGATGGTGTTGAGATTTTAACAGGTGTATTTGTGTTTGCTGCTACCAGTAGACCGGATTTGCTTGATGCAGCACTTTTGAGACCAGGCAGGTTAGATCGACTTCTATTCTGCGACTTCCCGTCTCAGCAGGAAAGGTTTGAAATTCTCACAGTACTTTCTAGAAAGTTGCCCCTGGCCAGCGATGTAGATCTGGCTGCAGTAGCTCATATGACTGAGGGATTTAGTGGAGCTGATCTCCAAGCTCTCCTTTCAGACGCACAACTTGCAGCAGTTCATGAAGTTTTGGACGATGCAAACACCTCTGGCCCTGAGAAAAAGCCAGTTATTACAAACACTCTTCTCAAGGGTACAGCCTCCAGGGCTAGACCATCTGTTTCAGATGAAGAAAAAAGAAGACTTTACAGTATTTACAGCCAGTTCCTTGATTCAAAGAGATCTGTTGCTTCTCAGTCAAGAGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGA 3618 0.4232 MELEVKLVGGIDNCFVSLPLPLIQLLHSTRSTQLPNILILELRSRSGDLWVVAWSGATSASNAIEVAQHFAECISLPDHARVQVKAASNVSHASLITIEPHSEDDWEILELNSEQAEAAILNQVRIVYEGMRFPLWLHGRTMITFIVVSVFPKKAVVQLMPGTEVSVAPKTRIRFSNSIADLDPDSYDREHTPKMLLRIQDPDRSCHTSACVKGVDLHMELTSAAFVNPETSKRLSLNRLQLVSIVPRLSNKANGTSRTNIMKTKGSSTTRGVDFGNLTDEKGCQQAIVYLLLSESVAKGHVMVAKSLRQYLRVGLHSWVYLKACDVNLEKAIPSFSLSPCHFRMLSQDNDGDNIIDKNKLTRTASGVFGDFADWSIHNGVMNVFSDESHSEEDEEVANQSENQNGLQHLLRVWYIAQLDAVASFTGMEVNALVLGSKTLLHFEVSYIKLGPKGKVQLASNSLENRSKTAEILFLLTIGEDSLHHEKITAYEIALDERNKMNSSPADQQLFKRLKFTDPISIQSLEDKISEEHITSEVTSLEWMKEAASDVINSSHRSDSVSDVASHRATTVSSRECLSFIELLLSLRQNCCLAILIDLARRINEESLCFKKTDRRNVELFTNVDWADFVPLVRWIDDDDAEKPRRGGMRNLLSSASGMPLPGHVLIYGPSGSGKTLLARTAAKYFEKHEDILAHIISVSCSKLALENVPIIRKEVTDNIIEALDHAPSIVIFDDLDSIISTSDSEGTQPSTTAAGLADFLVDVIDECGEKIRKSCGFGPIAFITSVQALEKIPQTLSSSGRFDFHIQLPTPAASERGAMLKHEIKRRHLQCADDILLDVAVKCDGYDGYDLEILVDRAVHAAVSRFLPSNAALNEHESPALLMEDFSQAMHDFLPVAMRDITKAASDGGRSGWDDVGGLVDIQNTIKEMIEMPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSQQERFEILTVLSRKLPLASDVDLAAVAHMTEGFSGADLQALLSDAQLAAVHEVLDDANTSGPEKKPVITNTLLKGTASRARPSVSDEEKRRLYSIYSQFLDSKRSVASQSRDAKGKRATLA 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3555 1205 Pfam Peroxisome biogenesis factor 1, N-terminal 96 169 IPR015342 GO:0005524|GO:0005777|GO:0007031
Acco02g3555 1205 Gene3D - 913 1174 IPR027417 -
Acco02g3555 1205 PANTHER AAA-FAMILY ATPASE 228 1179 - -
Acco02g3555 1205 SUPERFAMILY Cdc48 domain 2-like 92 169 IPR029067 -
Acco02g3555 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 914 1171 IPR027417 -
Acco02g3555 1205 SUPERFAMILY ADC-like 10 86 IPR009010 -
Acco02g3555 1205 CDD RecA-like_PEX1_r2 923 1080 - -
Acco02g3555 1205 FunFam PeRoXisome assembly factor 1083 1159 - -
Acco02g3555 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 892 IPR027417 -
Acco02g3555 1205 Pfam AAA+ lid domain 1104 1139 IPR041569 -
Acco02g3555 1205 FunFam Peroxisome biogenesis factor 1 91 170 - -
Acco02g3555 1205 Gene3D - 1083 1162 - -
Acco02g3555 1205 Gene3D - 645 812 IPR027417 -
Acco02g3555 1205 FunFam Nuclear valosin-containing protein-like 910 1089 - -
Acco02g3555 1205 Gene3D - 90 171 - -
Acco02g3555 1205 FunFam Peroxisome biogenesis protein 1 813 893 - -
Acco02g3555 1205 Pfam ATPase family associated with various cellular activities (AAA) 665 810 IPR003959 GO:0005524|GO:0016887
Acco02g3555 1205 Pfam ATPase family associated with various cellular activities (AAA) 952 1079 IPR003959 GO:0005524|GO:0016887
Acco02g3555 1205 SMART AAA_5 948 1084 IPR003593 GO:0016887
Acco02g3555 1205 SMART AAA_5 661 813 IPR003593 GO:0016887
Acco02g3555 1205 Gene3D - 813 892 - -
Acco02g3555 1205 ProSitePatterns AAA-protein family signature. 1052 1070 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3555 Acco-ChrAcco02 50087066 50122831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3555 658 868 Calmodulin-binding Proteins AT3G56690 28.302 6.84e-13 71.6