Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3546 ATGGCTCTTGAACTTGTCGGCGGACCTTTCATGAGCGCCATTTTCAACGTGCTTCTTGAGAGGATAGCTTCTTCCGAAATAGCTGATTCCTTCAGGAAGAATGGCTCCGAAAAGTTGCTCAGAAGGTTGAAGATAACCTTGTTGTCTGTTAATGCCGTACTCAACGATGCGGAGGAGAAGCAAGTGAGAAATTCAGCTGTGAAGGAGTGGCTCGATGAGCTTAAAGATGTCGCCTTTGATGCTGATGATCTCCTGGATGAGATTTACACCGATACGAAATCCAATGCGAACGAGGTAAAGACCCTTGATTTTGCTTCTATCAAGTTTTTCGATAGAATTGAGGTAGAACGGAAACTAGAAGATGTTCTTGAAAGGTTAGAATTCGTCATAAAACAGAAAGAAGCCCTGGATTTAAAAGCTGGTAGAGAAGCCAAAATGGCCCAGAAGACACCTACTTCGTCTTTAATAGAGGCATGTGATGTGTACGGAAGGGACAATGATAAAGACGTCTTAGTTAAGTTGTTGTTGTCAAATGATGCTGATGATGAAAATGTAGGTGTCATTCCCATAGTGGGAATGGGAGGAGCTGGGAAAACCACTTTAGCTCAACTTATTTACAATGATGATAAGGTACAGAAGGAATTTGACCTCAAAGCATGGATTTATGTGTCTGAAGAATTTGATATGTGTAAGATTACCAAAAACCTCTTGGAGACTATCACTTGTTGTAGTTGTGATATTGAAGATCTGAATTCACTCCAGCGCAGTTTAAAAAGTATGTTAATGAAGAAAAAGTTTTTGTTTGTGTTCGACGATGTTTGGAATGAGAATTATGATAACTGGGACAAGTTCAGCTGTCCATTTAAACATGCAGCCCAAGGAAGTAAGATTATTGTAACTACACGAAGCAGTTATGTTGCATCTATCATGCAAACTGTTCCGGCTTATAATCTCGGTGAGTTGTCAAATGAAGATTCTTGGCGTCTTTTTGCAAAACATGCATTTGGCTATAGAGATTCGAATATCAATCCTGGTGTGCAGAAAGTTGGTAAAGAAATAGTTAGAAAGTGCAAGGGATTGCCTTTGGCAGTGAAGACGCTTGCAGGGCTTTTGAGAGCTAAAAGTGATAAGCAGGAATGGTTGAAAGTATTAAGCAGTGAGATATGGGAGTTGCAAGACCATGAGAGCAATATTCTTCCAGCTTTGAGACTAAGTTATCACTATCTCCCTGCACATTTGAAAAGATGTTTTGCTTACTGCTCGATCTTCCCAAAAGATTATGAATTTGAGAAGGAGACGTTAACTTTGCTGTGGATGGCAGAAGGTTTGCTGCAGCAATCAAAACGACATAAGAGGATTGAAGAAGCTGGATATGAATACTTTTTTGAATTAGCTTCCAGATCATTTTTCCAGCAATCAAGACGTGATAAGACATGTTTTGTAATGCATCATCTTGTAAACGATTTAGCAAAATTTGCATCAGGAGACTTTTCTGTCAGAATTGAAGATAGCAATTCTAATGAAATTGGAGGAAGAACTCGTCATTTATCGCACATTATTGCAGATAGTTCCTCCCATCTAAACATGAATGATGTTTGCAAAGCAAAAAGTCTTCGCACCTTTCTGCAAATACAGTTGTTTTCTACCTCCATTGACTTGCACAACAACATGCAAAATGATTTGTTGATGAAGTTAAGGCGCTTAAAGGTGTTAACATTGGTAGGTGTGTATTTGTACAACTTGCCTGATTCAATTGGTGAACTAAAACATCTTCGGTATCTAGAATTGTCTGACACGAAGATCAAAGGGTTACCAAAATCCATCTGCAGCTTGTACAACTTACAAACACTGAAGTTAATTGGATGCTATAGTCTCAAGGAACTTCCTAAAAGGTTGCATGATCTTATTAACTTGCGTTACTTGGATATTACTGGCACTTGTTTGGAATGGATGCCATTGCACATGAGCAAGTTAAGAAACCTCCAAAAGTTGAGTGATTTCGTTCTAGGAAATCAACACGGATCTGTCATTGGTGAATTGGGAGAACTAAATGATTTACACGGATCATTGTTCGTTCATGGCTTAGAACATATTGTTGACCACAAGGATTCTGAAAGAGCAAAGTTGAAGGAAAAGAGTTGTCTTGACAAGTTATCTTTGGATTGGTGTGGGAGTGGTGATACTGATGATTCACAGCTTGAGAAAAAAATACTGGCCAGCCTACAACCAAATACAAATTTGAAGGAGCTTGTTGTTCATGGCTATCCAGGCACAGAATTTCCCAAATGGATAGGGGACGATTCCTTCTTCAACATGGTGTCTTTACAACTTAAGGGGTGTAAATATTGCTGTAAGTTACCAGCACTTGGACAGCTCCCATCATTGAAAGAGCTTCGAATCAGTAGATTTGACGGATTAGTCAGCATTGGCACCGAGTTTTTTGGCAATGAAACTCATTTTTCTGCTGTAACTAAATGCTTCCCTGCACTTGAAATTCTGAGATTTGAGCATATGTCAGCATGGGAAAATTGGAGTCATGAAGCTGACACTGGCTTCAGGGCTTTCCGTCAACTTCGAGAACTTCATATACAGAGTTGTGCCAAGCTGACAGGGGATTTACCTTGTAACCTTCCATCTTTGAAGCTACTCACAATCACAGACTGCAATCAGCTTCTTTGTTCACTTCCCACTGCTCCTGATTTGCGCGTATTGAACATTCAGAATTGTGGGAATTTAGAATTCCCAGTACATGGTCCTCGCTGCTACCAGTTACTCACATCCATGTACTTGCTTGATAGCTTTGATTCACTCAAGTTCTTGCCATTAGATCTCTCCCCAAATCTCAAGTCTTTAGATATATGGGGTTGTAAGAATCTGGAAGCTCTTACTGTTTCTGAATCAGATGCAGCTTCTCCTCCAGATCTCCCATCATTAAGATCCGTAAGCATTAGACATTGTCCAATACTTGCATCTTTTCCCAAGGGAGCATTATCAGCCCCAAAACTGACTTTGCTGACAATCACCTACTGCGAGAAGTTGAAGTCTCTACCTGAGCAAATGCACAGTCTGATGCCAAGCTTGAAGGAAGTCCAGCTTCGAGGTTGTCCACTGATGGAGTCATCTGATGTGAGATCCCTCAGGATTCGGATTTGTGATAAACTGAGAGAGGAGAAACAAAATCTATCTGATCCTGTCTTTGCTAGTTTTAAGGGACTTTCACCTATTTGTAGCCCCTCTTCAAGGTAG 3246 0.402 MALELVGGPFMSAIFNVLLERIASSEIADSFRKNGSEKLLRRLKITLLSVNAVLNDAEEKQVRNSAVKEWLDELKDVAFDADDLLDEIYTDTKSNANEVKTLDFASIKFFDRIEVERKLEDVLERLEFVIKQKEALDLKAGREAKMAQKTPTSSLIEACDVYGRDNDKDVLVKLLLSNDADDENVGVIPIVGMGGAGKTTLAQLIYNDDKVQKEFDLKAWIYVSEEFDMCKITKNLLETITCCSCDIEDLNSLQRSLKSMLMKKKFLFVFDDVWNENYDNWDKFSCPFKHAAQGSKIIVTTRSSYVASIMQTVPAYNLGELSNEDSWRLFAKHAFGYRDSNINPGVQKVGKEIVRKCKGLPLAVKTLAGLLRAKSDKQEWLKVLSSEIWELQDHESNILPALRLSYHYLPAHLKRCFAYCSIFPKDYEFEKETLTLLWMAEGLLQQSKRHKRIEEAGYEYFFELASRSFFQQSRRDKTCFVMHHLVNDLAKFASGDFSVRIEDSNSNEIGGRTRHLSHIIADSSSHLNMNDVCKAKSLRTFLQIQLFSTSIDLHNNMQNDLLMKLRRLKVLTLVGVYLYNLPDSIGELKHLRYLELSDTKIKGLPKSICSLYNLQTLKLIGCYSLKELPKRLHDLINLRYLDITGTCLEWMPLHMSKLRNLQKLSDFVLGNQHGSVIGELGELNDLHGSLFVHGLEHIVDHKDSERAKLKEKSCLDKLSLDWCGSGDTDDSQLEKKILASLQPNTNLKELVVHGYPGTEFPKWIGDDSFFNMVSLQLKGCKYCCKLPALGQLPSLKELRISRFDGLVSIGTEFFGNETHFSAVTKCFPALEILRFEHMSAWENWSHEADTGFRAFRQLRELHIQSCAKLTGDLPCNLPSLKLLTITDCNQLLCSLPTAPDLRVLNIQNCGNLEFPVHGPRCYQLLTSMYLLDSFDSLKFLPLDLSPNLKSLDIWGCKNLEALTVSESDAASPPDLPSLRSVSIRHCPILASFPKGALSAPKLTLLTITYCEKLKSLPEQMHSLMPSLKEVQLRGCPLMESSDVRSLRIRICDKLREEKQNLSDPVFASFKGLSPICSPSSR 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3546 1081 Gene3D - 142 314 IPR027417 -
Acco02g3546 1081 Pfam NB-ARC domain 180 406 IPR002182 GO:0043531
Acco02g3546 1081 SUPERFAMILY L domain-like 482 890 - -
Acco02g3546 1081 Gene3D Ribonuclease Inhibitor 925 1073 IPR032675 -
Acco02g3546 1081 Gene3D - 16 120 - -
Acco02g3546 1081 Coils Coil 112 132 - -
Acco02g3546 1081 PRINTS Disease resistance protein signature 260 274 - -
Acco02g3546 1081 PRINTS Disease resistance protein signature 187 202 - -
Acco02g3546 1081 PRINTS Disease resistance protein signature 875 891 - -
Acco02g3546 1081 PRINTS Disease resistance protein signature 357 371 - -
Acco02g3546 1081 Gene3D Ribonuclease Inhibitor 527 913 IPR032675 -
Acco02g3546 1081 Coils Coil 40 60 - -
Acco02g3546 1081 FunFam Probable disease resistance protein At1g63360 406 492 - -
Acco02g3546 1081 PANTHER DISEASE RESISTANCE PROTEIN RP 40 866 IPR044974 GO:0006952
Acco02g3546 1081 FunFam Probable disease resistance protein At1g61300 144 314 - -
Acco02g3546 1081 Gene3D - 320 404 IPR042197 -
Acco02g3546 1081 Pfam Rx N-terminal domain 10 95 IPR041118 -
Acco02g3546 1081 Gene3D - 405 492 IPR036388 -
Acco02g3546 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 420 IPR027417 -
Acco02g3546 1081 SUPERFAMILY RNI-like 826 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3546 Acco-ChrAcco02 49942790 49946035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3546 568 664 WRKY Transcription Factor Family AT4G12020 35.714 1.10e-07 54.7