Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3535 ATGATCAAGCTGTTTGCGATCTCTTGGACACCATTTTCAGAGTTGTGTTTTTTTCTCCAACCTCAGCAACACGTAAGGACGGACGCATTGACGACCACTGGAACATTACGCTACGCAACTCGATTCCGAACTCAGGCGCAGCCGAATCTTCTCCGATTCGTTTCAGATAGCAGAACGCTTCCTTCTCTCTTCTCGGATGATCTGCCGCGCCTTAATTTCTACCTCAACCTCTCGATGTGCAAGTCCAAAAACAGCACAAACGTGATGGAACCCAGAAGAACCCGTCGATCTCGCACCTTTCAATCGTCTTCTTCTTCGCCTCGCACCACCGCTGGTAATCTTCGTCCGAATTCTTCTTCGTTTAACCTTAGCACAGAATCCACTAGCTACTACTACAACAACAAGGACTGGTCTAAAGCCTCCTCCGCTTCCAGTGGATCCTCTCTCTCTAGCCTTAAGGATTCTTTGCCTGAGAACGCTCATATCTACGAGTTCTCTGAGATTTCCTCTGCCACCCGAAATTTCCAAAAAGAAAAATACTCCTCGTCCTCTTCTTCTTCGTCTTGGCGATGCTCCATTCGCAACAAGGATGTTCTGGTTTTCCAGCGCAAGTTTCGCCGTCCAATGGACTTGCCGGAGCTCCGAGATCGGCTTACTGTGATTTGCCGGAGCCATCATAGTAGCTTGATCAAGCTTCTCGGGGCATCGGTCTCCGGTAATTATATTTATCTTGTGTATGAGTATGTTCGCGGTGTGAATCTCGCTGATTGTCTTCGAAATCGTTTGAATCCCAGCTACACTGATCTGTCGACATGGCTTTCTCGGATGCAAATCGCCACTGATCTTGCCCACGGTCTTGATTACGTTCACCATTTCTCCGGCCTGAACTCCAATTTCGTCCACAACCATATCACGAGCTCGAGTATTGTCATCACGGAGGACACTCTGAATGCGAGGATTTGCCATTTTGGTACCTCGGAATTGTGCGGTGAAATCGCTGCCGCCGAAACACCTTCCAGCTCCAATTCTGCGAAAATAAAGGAGCTAAAGAGGTCCGGTAGCCGGACGGTTAGGCTGGAAGGGACAAGAGGGTATATGCCGTCGGAGTATCTGGCAACGGGGGTCGCGACGCGGAAATCGGATGTGTACGCGTTTGGCGTCGTGGTTTTGGAGCTACTAAGCGGGCAAGAAGCGTTGAAGTACGAATTGGACGAGGACGGTGGATATAGAAGGTTTAGTGTGGTGGAGACGGCGAGGTTAGCTATGGCGGAAGAAGGCGGAGCGAGGAAGTGGGTGGACAAGAGGTTGAAGGATTCGTTTCCGGTGGAAGTGGCGGCTAAGATGATTCGGGTCGGGCTGGATTGCGTGGAGGAGAATCCGAATGAGAGACCAGATATGGGTCGGGTTGCGATTTCAGTATCGAAGTTGTATCTGGATTCGAAGAAGTGGGCCGAGAGTATGGGATCGGCTATTGACTTGACTGTCTCACTAGGCCCTCGGTGA 1503 0.503 MIKLFAISWTPFSELCFFLQPQQHVRTDALTTTGTLRYATRFRTQAQPNLLRFVSDSRTLPSLFSDDLPRLNFYLNLSMCKSKNSTNVMEPRRTRRSRTFQSSSSSPRTTAGNLRPNSSSFNLSTESTSYYYNNKDWSKASSASSGSSLSSLKDSLPENAHIYEFSEISSATRNFQKEKYSSSSSSSSWRCSIRNKDVLVFQRKFRRPMDLPELRDRLTVICRSHHSSLIKLLGASVSGNYIYLVYEYVRGVNLADCLRNRLNPSYTDLSTWLSRMQIATDLAHGLDYVHHFSGLNSNFVHNHITSSSIVITEDTLNARICHFGTSELCGEIAAAETPSSSNSAKIKELKRSGSRTVRLEGTRGYMPSEYLATGVATRKSDVYAFGVVVLELLSGQEALKYELDEDGGYRRFSVVETARLAMAEEGGARKWVDKRLKDSFPVEVAAKMIRVGLDCVEENPNERPDMGRVAISVSKLYLDSKKWAESMGSAIDLTVSLGPR 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3535 500 ProSiteProfiles Protein kinase domain profile. 137 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3535 500 SUPERFAMILY Protein kinase-like (PK-like) 174 469 IPR011009 -
Acco02g3535 500 PANTHER OS09G0572100 PROTEIN 79 500 - -
Acco02g3535 500 MobiDBLite consensus disorder prediction 85 120 - -
Acco02g3535 500 MobiDBLite consensus disorder prediction 98 120 - -
Acco02g3535 500 Pfam Protein tyrosine and serine/threonine kinase 213 469 IPR001245 GO:0004672|GO:0006468
Acco02g3535 500 Gene3D Phosphorylase Kinase; domain 1 135 248 - -
Acco02g3535 500 Gene3D Transferase(Phosphotransferase) domain 1 251 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3535 Acco-ChrAcco02 49722496 49725261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3535 158 487 Receptor kinase-like Gene Family AT1G51940 29.499 4.71e-39 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco02g3535 PK_Tyr_Ser-Thr 3.2e-20 CL0016