Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3530 ATGGAGTTTTCGAAGGTCAATGAAGGTAATATTGGGGCCTTTGAGCTTTGTCATAGCGGAGATACGGTCTGTAATGGTGATCCTCTGAACTGGGGGATGGCGGCGGAGGCTCTGAAGGGGAGCCATTTGGACGAGGTGAAGCGGATGGTGGAGGAGTATCGGAAACCGGCAGTGAAAATCGCCGGCAAATCGCTGAAGATATCACAGGTGGCGGCGATTGCTAACCATGACGCCGGCGTGGCAGTGGAGCTGTCGGAGGAGGCTCGTGCCGGCGTAAAGGCCAGCAGTGACTGGGTCATGGAAAGCATGAACAAGGGTACTGACAGCTACGGTGTCACCACCGGCTTCGGCGCCACCTCACACAGGAGAACCAAGCAGGGTGGGGCCCTCCAGAACGAGCTCATCAGATTCTTGAATGCTGGAATCTTCGGCAATGGCACAGAATCGTCTCACATTTTGCCTCACTCGGCCACAAGAGCCGCCATGTTGGTCAGGATCAACACTCTTCTTCAAGGATATTCCGGCATCAGATTTGAGATCTTAGAAGCCATGACCAAGTTCCTTAACCACAACATCACCCCATGCCTCCCTCTCCGGGGAACCATTACTGCTTCCGGCGACCTCGTCCCTCTTTCCTACGTCGCCGGCCTCTTGATCGGCCGCCCCAACTCCAAATCCATCGGCCCCAACGGCAGAGTCCTCTCCCCTAAAGAAGCCTTCCACCTCGCCGGAATCAACGGCGGTTTCTTTGAACTTCAGCCCAAGGAAGGCTTAGCTCTTGTTAATGGCACTGCCGTAGGTTCTGCTTTGGCTTCCATAGTTCTTTTCGAGGCAAACATCCTCGGTGTCCTGTCGGAAGTCATGTCAGCGATTTTCGCCGAAGTCATGCAGGGCAAGCCGGAGTTTACTGACCACTTGACACATAAGCTCAAACACCACCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACACATTTTAGATGGAAGCTCTTATGTTAAAGCAGCTCAAAAGCTTCATGAGACTGATCCCCTTCAGAAGCCTAAACAAGATAGGTATGCTCTGAGAACTTCTCCTCAATGGCTCGGGCCTCAGATCGAAGTGATAAGGCACGCGACGAAGATGATCGAGAGAGAGATAAACTCTGTAAACGACAATCCACTGATTGATGTTTCAAGGGGCAAGGCTCTTCATGGCGGAAATTTCCAAGGTACCCCAATTGGTGTTTCCATGGACAACACTCGCTTGGCCCTTGCTTCCATTGGAAAACTCATGTTTGCTCAATTCTCTGAGCTTGTCAATGACTTTTACAACAATGGTTTGCCTTCGAACCTCTCCGCGAGCCGATACCCGAGCTTGGATTACGGCTTCAAAGGAGCCGAAATCGCCATGGCTTCTTATTGTTCAGAGCTTCAATTCCTTGCCAACCCTGTAACCAATCATGTTCAGAGTGCAGAGCAACACAACCAAGATGTTAACTCTTTAGGGCTAATTTCCTCAAGAAAAACAGCTGAAGCTGTTGAGATTCTCAAGCTCATGTCCTCCACTTTCTTAATTGCACTATGCCAAGCCATTGACCTGAGGCATTTGGAAGAGAACTTAAAGAATACTGTCAAGAACACTGTGAACCAGGTGGCCAAGAAGGTCCTAACAATGGGTGTCAATGGAGAATTACTCCCTTCAAGATTCTGCGAAAAGGATTTACTCACGGCCGTGGATCGCGAACACGTGTTCACTTACATCGACGATCCTTGCAGCGCAACATACCCATTAATGCAGAAACTGAGACAAGTTCTGGTTGATCATGCCCTGCAAAATGGTCACAGAGAAAATGACTCAAACACTTCCATTTTCTTAAAGATTGCAGCTTTTGAGGAAGAACTAAAGACCCATTTGCCCAACGATGTAGAAAGTGCAAGGATTGAGGTTGAAAATGGAAAATCTGTGATCCCTAACAGGATCAAAGAATGCAGATCTTATCCACTGTACAGATTTGTGAGAGAAGAACTTGGGACTGGTTTGCTAACTGGTGAGAAAGTTAGGTCACCTGGTGAAGAATGTGACAAAGTCTTCGCTGCAATGTGTGAAGGGAAGTTGATTGATCCTCTATTGGAGTGCCTTAAGGAGTGGAATGGGGCTCCTCTGCCAATATGCTAG 2157 0.4896 MEFSKVNEGNIGAFELCHSGDTVCNGDPLNWGMAAEALKGSHLDEVKRMVEEYRKPAVKIAGKSLKISQVAAIANHDAGVAVELSEEARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGNGTESSHILPHSATRAAMLVRINTLLQGYSGIRFEILEAMTKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPNGRVLSPKEAFHLAGINGGFFELQPKEGLALVNGTAVGSALASIVLFEANILGVLSEVMSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHETDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRYPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNTVNQVAKKVLTMGVNGELLPSRFCEKDLLTAVDREHVFTYIDDPCSATYPLMQKLRQVLVDHALQNGHRENDSNTSIFLKIAAFEEELKTHLPNDVESARIEVENGKSVIPNRIKECRSYPLYRFVREELGTGLLTGEKVRSPGEECDKVFAAMCEGKLIDPLLECLKEWNGAPLPIC 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3530 718 NCBIfam phenylalanine ammonia-lyase 27 708 IPR005922 GO:0005737|GO:0006559|GO:0016841
Acco02g3530 718 Gene3D - 19 264 IPR024083 -
Acco02g3530 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Acco02g3530 718 PANTHER HISTIDINE AMMONIA-LYASE 25 718 IPR001106 -
Acco02g3530 718 CDD PAL-HAL 63 528 IPR001106 -
Acco02g3530 718 Gene3D - 531 652 IPR023144 -
Acco02g3530 718 FunFam Phenylalanine ammonia-lyase 265 579 - -
Acco02g3530 718 FunFam Phenylalanine ammonia-lyase 19 264 - -
Acco02g3530 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Acco02g3530 718 FunFam Phenylalanine ammonia-lyase 531 652 - -
Acco02g3530 718 Pfam Aromatic amino acid lyase 65 542 IPR001106 -
Acco02g3530 718 SUPERFAMILY L-aspartase-like 27 718 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3530 Acco-ChrAcco02 49650946 49656137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3530 5 718 Monolignol Biosynthesis Gene Families AT2G37040 80.529 0.0 1205