Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3495 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGATTTCTTGAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCATGGTTCCCGAGAGTTCAGTCGGTGGGGATCGGCCGATTTCCGCAGAACGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTCCGGAAGAATCTGGTCATGGATATGTACTATCTCGGTCCAGTGACAAGATGCTGGAAGAAGATAACTGTCGCCCATCTGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAGAATAGAGGATCCTTTAGCCAGAGAGATTGGAGGGGACATTCATGGGAGGCCACCAACGGCTCTCTTAATTTGTCCAGGAGGCCATCTGATCTGACTATTGACCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTCAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGATTGGTGGTGTCAATGGGTTGGGTACCGCACAGAGATTGGATAGAGAGCATTCTCTTGGTCCAAACTTTTGGAAGCCTATTAAATGGTCCCGTTCTGGAAGCTTATCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGCTCAAGGAGTGGAGGGGCAGATTCGAATGAAGCGAAGTCTGAATTGCATCCAAAAAATGCAACTCCTATTGAATCCCATTCTGGGGATGGTGCTACATGTGCGACATCTTCTGCTCCCTCTGAAGATCCAATATCCAGGAAGAAGCCTAGGCTGAAGTGGGGTGAGGGACTTGCAAAATATGAGAAGAAGAAAATTGAGGAACCTGATATAAGTGCAAGCAAGGATGACCCTGTCTTGTCTGCTAGTAATATTGAGCCCTCTAACTTTCTCGGTTCAAATTTACTAGATAAAAGTCCAAAAGTTACAGGCTTTTCAGATTGTGCATCCCCAGCCACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGAGGATAAACTTTATGGAAAAGCTGTAAATAGTGACAATGATGTTAGTAATTTGAATGGTTTGTTCGGGCATCAGAATCATCTACAGACTTTCTCTTTGAATTTAGAGAAGTTGGATATTGACTCCCTGAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACCTAAGTTCTGTGGATCCTTGCATAGCAAGTTCTGCTGCAATGAATAAGTTGTTGATATGGAAAGCTGACTTTTCTAAGGTACTGGAGGTTACTGAAGCTGAAATAGATTTACTTGAAAGTGAGTTGAAGTTACTAAAATCTGAATCTGGAAATAGTTGTCCGTGTCCTGCAGCATTGGGCTCCTCAATGATGGCAAATAGTACAAAGTCTTGTGAAGAACAAGTTAGAGGCTATGATAAGGTTTCCCGGCCAGAGCCATTGCAGGTTTGTTCTTCTGCTCTTCCTGATGCAGAGAAGATGTCCCCTTCAACTAAAGTGCATATTATTCATGAAAATGGCAAGGGGGAAGATATTGATAGCCCTGGAACAGCAACTTCTAAATTTGTGGAGCCTCAACCCCTTATTAAAGCAGTCTCTTCATTTGATACTGGGGGAAATGATAATTGCTGTGGAGGCTTTGATGCCAATCAATCTGCAAGCAGTAGATGCGTAGTGCCCTGTTCCACTAGTGAGCAAGCTATGGAGGTAAAAGGTGGCTTGGGTGCTGCTCCTGGTGCAAGTGCTTGCTCTGGATCTGAGGATACATTGTGTAATGAAATTATTTCTAAAAATAAAGAACATGCTAGCAGAGTGGGTGATGAATTTGTGCAGTTATTGCCTAAGGTTTGTTGTAAGGTTGGTAATACGGGAGTTATCAATGATTCATGCTCTTCAGCTGCTGCTGTTAGAGAAAAATTTGCAGAGAGAAAGCGGTTAGCAAGGATTAAGGAGCGTGTAATAACCCTTAAGTTTAAAGCCTTGCACCATCAATGGAAAGAAGATGTGCGACTACTCTCTTTACGAAAATGTCGTCCAAAATCTCATAAGAAGCTTGAAGTTGGCATTCGGATTACTAATAATGGTTTTCAAAAGAATCGGTCCTCCATTCGTTCTCGGATTTCCTACCCTGGAAATAATTTAAGCTTGGTTTCAACATCTGAGATAAATAATTTTGCCAACAAACTTCTCTCTGATCCCCAAGTTAAAGTTTACCGGAGCACTTTGAAGATGCCGTCTTTAATTTTGGATGATAAGGAGAAGATGATGTCAAGGTTTCCATGTAGTAATGGGTTGGTTGAAGATCCTTTGGTGTATGAGAAAGAGAGGGCAATGATCAACCCTTGGACATCAGAAGAGAAAGATCTTTTCTTGGAGAAATTTGCTGCTTTTGGGAAAGACTTCCGGAAAATTGCTTCTTTTCTCGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGAGAAAATTAAGCAGGATCTTAAGAAGACAGGGAAGTCATATTTGACCAACACTGACTTGGTAGTATCAGGTAAAAAATGGAATCGAGAAATAAATGCTGCTTCGCTCGAGATTTTAAGTGCAGCTTCAGTGATAGCAGGCCATGCAGACAGAATAAGTGGTAATAAAAAATTGCGTTCAGGGAGTTCTCTTTTAGGGGGCTATGGTAATATGAAGAGATCAAAGGGTGAGGATAGCATCCTAGAGACATCAAACAGTTTTGATGCTCTTAGGGATGAAAGAGAGGTAGTTGCAGCTGATGTATTGGCTGGGATATGTGGTTCTATATCATCTGAGGCTATGAGTTCCTGCATAACAAGCTCTGTTGATCCTGTAGAGGGTAGCAGGGATAGGAGCCTGAAAACAAACCCTGGGAAAAAGCAATTGTTGACGCCTGATGTTACTCAGAGTGTTGATGACGATACCTGTTCAGATGAGAGCTGTGAAGAGATGGATCCTACTGATTGGACTGATGAGGAGAGGTCAGCATTTCTTCAAGCTGTATCTTCTTATGGGAAGGACTTTGCTAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTGTTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTCATGCGGCCCAAGTCTGTAAATTCAGGTTACCCAGGGAATGATGATGAGAATGGTGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACAGGTTCAGCAATTGGCGCTGATAGGTCAGGCACTAGAACTGATGAGGATCAGCTGTTGTCTGTCATGAATACATACTCTGATGAATTTAATCCCGTTGAACCCAGGGTCTTGTCAACTGATTTGACTATATCAAATAATATTGGAGCAGAAGTGGATCAAAACGGTGAAGATGTGGATGATATGGTTTCTGATTCTTGCGAAATGGATGATAAACCTAAACTGGGCTATGTTGGTGGTGGAGATGTCTTGTACAGTTCTGACAAGTCTGGTCCTGCCAGTGGCCAGACAGCTATGAATATGTTAATTACTGTAAAAGTGGGAGAAGATGAAGCGAATAAATTGGCAGGTGCAGTTACGGAGTCAGTACCTTACCAATCTAATTCTTTTGTTGAGGCTAAAGTGCTTTCTGAGGTTTCTTCTGGAGGTCTTGGAGAGGATTTGACAGGGCAGAAACAATCACTACCTCCATATCTTGATGATAGGGATAATAAACGTGAAGCAGTTGCTGTTGTAGCTGAATCAAAAAGCTCAGTTCAAGATTCAAGTACAGTGGTAAAGGAGTTAACCGGGCAGAAGCAATCACTGCCTCCATGTCTTGATGACAGAGGTAATAAACATGAAGCAGCTGCTGATGCAGGTGAATCAAAAAGTTCAGTTCAAGATTCAAGTACAATGGCAAATGCTTCACCTTTACCTGCAGGCACTTCTCCTACAGGTTTGAATCTTGAAGATAAGAATGAATCTTCTCTTGGAGAGCCCTCTATATCAGCATTGCCGCTGGGGGATTCTCAGTCCAATGCAAAATTATTGTTGCAAGATACCATTCAGGGTGAGAAAAAAGTTATCCAAGATCAACTGCCTTCTGCATGTTATTTTCAAGGAAGTAGAGATGTGCGCTGCCATAATTTCACCAGCAAAGATGGTCAACATGATCATATTCCCTGCCATTTATTGGACTGTGTTGAGGCTAATAGCATACTGCAGGGGTTTTCGTTGCCTATTAAACAAGAAGTGAAGGGTGATACTAGTTGCAGCAGGTCAGCATCTGAATTCCCGCTCATGTCCCGAAAGATTGAACAACCCTGTGACCGTTACAAATCAGAGTCGCCTACTTCAGTTGATTCTGAAGTGACATCCAGAAATGGTGATGTGAAGCTGTTTGGGAAGATATTAACAAATCCTTCATCCACTCAGAAATCTAATTTGAATTCCAAGGGACGTGAAGAAACTGGTACCCGCCACCCAAGGATTAGTAGCAAATCTTCTACCCTGAAATTTAATGGCCATTGCCATCAAAATCCTGATGGAAATTCAACAATTCTGAAGTTTGATTGTGGTGATTACAATTTAGGCCGTGAAAATGTTCCCATGACTAGTTTTGGTTTTTGGGATGGGAGTAAGATACAGACCGGCATTTCATCATTACCCGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTCAGTAATTATGCTACATCCTCGGCTAAACTGGAGCAACAGTCATTGCATGCATTTGCCAAGAGTAATGAACAGCACCTGAATGGCTCAACGTTTACACAACGAGAAGTAAACAGCAGCAATGGTGTGATTGATTATCAAATGTTTAGGAGTAGGGATGCCCCGAAAGTGCAGCCATTTACGTTAGACATGAAAAACCCCCAAGATGTATTTTCCGAGGTGCAAAGAAGAAATGGTTTTGAAACTCTGGCAAATTTACAGCAGCAGGGGAGAGGAATGGTTGGAATGAATGGTGGTGTTGGGAGGTCAGGGATTCGGGTGGGAGGATCACACAGTGGCGTCTCAGATCTTGTGACAGCCATCAAAATGCATTATTCCAATTCTGATCAGTATGGTGGTCATAATGGGAGTATCATGAGAGAAGATGAATCATGGGGAGGAAAAAAGGGGGACTTAAGCAGGTAG 5184 0.4292 MPPEPLPWDRKDFLKERKHERSESLGSVARWRDSSHHGSREFSRWGSADFRRTPGHGKQGSWHLFPEESGHGYVLSRSSDKMLEEDNCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWEATNGSLNLSRRPSDLTIDQRSADDMLTYPSHPHSDFVNTWDQHHMKDQHDKIGGVNGLGTAQRLDREHSLGPNFWKPIKWSRSGSLSSRGSGFSHTSSSRSGGADSNEAKSELHPKNATPIESHSGDGATCATSSAPSEDPISRKKPRLKWGEGLAKYEKKKIEEPDISASKDDPVLSASNIEPSNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPGVEDKLYGKAVNSDNDVSNLNGLFGHQNHLQTFSLNLEKLDIDSLSSLGSSLIGLLQSDDLSSVDPCIASSAAMNKLLIWKADFSKVLEVTEAEIDLLESELKLLKSESGNSCPCPAALGSSMMANSTKSCEEQVRGYDKVSRPEPLQVCSSALPDAEKMSPSTKVHIIHENGKGEDIDSPGTATSKFVEPQPLIKAVSSFDTGGNDNCCGGFDANQSASSRCVVPCSTSEQAMEVKGGLGAAPGASACSGSEDTLCNEIISKNKEHASRVGDEFVQLLPKVCCKVGNTGVINDSCSSAAAVREKFAERKRLARIKERVITLKFKALHHQWKEDVRLLSLRKCRPKSHKKLEVGIRITNNGFQKNRSSIRSRISYPGNNLSLVSTSEINNFANKLLSDPQVKVYRSTLKMPSLILDDKEKMMSRFPCSNGLVEDPLVYEKERAMINPWTSEEKDLFLEKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKIKQDLKKTGKSYLTNTDLVVSGKKWNREINAASLEILSAASVIAGHADRISGNKKLRSGSSLLGGYGNMKRSKGEDSILETSNSFDALRDEREVVAADVLAGICGSISSEAMSSCITSSVDPVEGSRDRSLKTNPGKKQLLTPDVTQSVDDDTCSDESCEEMDPTDWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKSVNSGYPGNDDENGGGSDTDDACVVETGSAIGADRSGTRTDEDQLLSVMNTYSDEFNPVEPRVLSTDLTISNNIGAEVDQNGEDVDDMVSDSCEMDDKPKLGYVGGGDVLYSSDKSGPASGQTAMNMLITVKVGEDEANKLAGAVTESVPYQSNSFVEAKVLSEVSSGGLGEDLTGQKQSLPPYLDDRDNKREAVAVVAESKSSVQDSSTVVKELTGQKQSLPPCLDDRGNKHEAAADAGESKSSVQDSSTMANASPLPAGTSPTGLNLEDKNESSLGEPSISALPLGDSQSNAKLLLQDTIQGEKKVIQDQLPSACYFQGSRDVRCHNFTSKDGQHDHIPCHLLDCVEANSILQGFSLPIKQEVKGDTSCSRSASEFPLMSRKIEQPCDRYKSESPTSVDSEVTSRNGDVKLFGKILTNPSSTQKSNLNSKGREETGTRHPRISSKSSTLKFNGHCHQNPDGNSTILKFDCGDYNLGRENVPMTSFGFWDGSKIQTGISSLPDSAILLAKYPAAFSNYATSSAKLEQQSLHAFAKSNEQHLNGSTFTQREVNSSNGVIDYQMFRSRDAPKVQPFTLDMKNPQDVFSEVQRRNGFETLANLQQQGRGMVGMNGGVGRSGIRVGGSHSGVSDLVTAIKMHYSNSDQYGGHNGSIMREDESWGGKKGDLSR 1727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3495 1727 Coils Coil 422 449 - -
Acco02g3495 1727 Gene3D - 765 837 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 33 47 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 957 976 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 1259 1275 - -
Acco02g3495 1727 SUPERFAMILY Homeodomain-like 1002 1051 IPR009057 -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 204 227 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 1501 1516 - -
Acco02g3495 1727 Pfam Myb-like DNA-binding domain 788 829 IPR001005 -
Acco02g3495 1727 Pfam Myb-like DNA-binding domain 1004 1044 IPR001005 -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 1478 1516 - -
Acco02g3495 1727 ProSiteProfiles SANT domain profile. 784 835 IPR017884 -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 78 111 - -
Acco02g3495 1727 CDD SANT 1005 1043 IPR001005 -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 244 261 - -
Acco02g3495 1727 Gene3D - 946 1058 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 1300 1346 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 1703 1727 - -
Acco02g3495 1727 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1723 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 983 1005 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 1058 1078 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 1225 1346 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 204 269 - -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 17 111 - -
Acco02g3495 1727 SMART sant 1001 1049 IPR001005 -
Acco02g3495 1727 SMART sant 785 833 IPR001005 -
Acco02g3495 1727 ProSiteProfiles SANT domain profile. 1003 1051 IPR017884 -
Acco02g3495 1727 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1005 1054 IPR017930 -
Acco02g3495 1727 SUPERFAMILY Homeodomain-like 772 833 IPR009057 -
Acco02g3495 1727 MobiDBLite consensus disorder prediction 988 1005 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g3495 Myb_DNA-binding 9.8e-09 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g3495 02 49055129 49062355 Acco02g3495 02 49055129 49062355 ECH