Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3478 ATGACTTGTTTTCTTTCGCGGTTCTTGGTAAGTGACCAGGACATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCATTCCTCGTTCCAAGAAAGATCAGGACAAAAAGCTGAAGTCAAATGAAGTAGGTTATGACAATCAAAAGGGCTTGGAAGCAGCTTTGCCAAGTGAAGGAGCAAAATTTGCTGTTCCTCCTGCTTTTCCATCCATAGAAGATACTAAATTAAATGGAACAGAGAATGAGCAGAGCAAGTATGCTTATTCTCTTGCTCTTGCCACTGCTGCTGCAGCAGAGGCTGCCGTTGCTGCTGCTCAGGCTGCTGCAGCAGTTGTTCGTCTTACTAGTGTTTCCCGTTTCCGTGGAAAGTCGAAGGAAGACATGGCAGCTACCAAAATCCAGACGGCATTTCGAGGATATTTGGCAAGAAGAGCATTACGTGCCCTGAAAGGTTTAGTGAGGTTGAAGAGATTGATTCAGGGGAAATCTGTTAAACGACAAGCAGCATCTACTTTACACTGCATGCAAACCTTCACTAGATTGCAGTCTCAGGTCCATGAGAGGAGGACTAGAATGTCAGAGGAGAATCAAGCTCTTCAGTGGCAGCTGCCGCAGAAACATGTGAAAGAACTTCAGAAGTTGCAAGCTGCTACTGTTGAAGACTGGGATGATACAGCGCAATCAAAGGAGCAAATGGAAGCAAGACAGGCTAAAAGGCAAGAAGCTGCGGTTCGAAGAGAGAGAGCTCTGGCCTATTCATTTTCACATCAGCAAAAGTGGAGGAACTCTTCGAAACCTGCAAGTCCCACGACATTCATGGATCCAAACAACCCACACTGGGGCTGGAGTTGGCTAGACCGATGGGTAGTAGCACAGCCAGGTCAGGATACCCAAAGTGGTATGGTTCCCAGCCAGCATGCATATGCAAAAAGCATGGCAAACCAACCCATGTCTGTTGGAGAAATTACTAAACTGTATACTTCTCGCGGTCCTATTCATCACAATAGCAAGCCTTCTCCGGCTGGCCAAAAATTAAGCCGGCCCCCGAGTCACCGGTCTCGTTCAACCCCACCTCAAAAGGTCCCACCTGTCTCATCTACTTCTACCAAAGTAAGAGCACCAAGCCCAAAGTCATCTTCTTGGGGCCGTGATGATGACTTGAGGAGTGCAACTAGCTCTCAGTCACAACAGTACCGGAGACATACTATTTCAGGATCATCATTCAGAGATGATGAGAGCTTCAGAAGCTCATCTGCAATCTCAACTTGCACGGTTCCTACTAAATCAGCTAAGACCAAATCCAGAATGGAGAGTTCATCACTGAGTGCAGATAAAAATGGGACATCAGAGAAAGGATCCTCCAATGTGAAGAAGCGATTATCATTCACAGATTCTTCCCCTGCTCGTTTGAGGAATCATTCTGGTCCTCTTAAGGAGGATCTTTTGGCTTCAGCCACTAAAAAGAAAGTTGCCAATGGTAGAAGGTAG 1497 0.4643 MTCFLSRFLVSDQDMGRKGSWFSSVRKVLIPRSKKDQDKKLKSNEVGYDNQKGLEAALPSEGAKFAVPPAFPSIEDTKLNGTENEQSKYAYSLALATAAAAEAAVAAAQAAAAVVRLTSVSRFRGKSKEDMAATKIQTAFRGYLARRALRALKGLVRLKRLIQGKSVKRQAASTLHCMQTFTRLQSQVHERRTRMSEENQALQWQLPQKHVKELQKLQAATVEDWDDTAQSKEQMEARQAKRQEAAVRRERALAYSFSHQQKWRNSSKPASPTTFMDPNNPHWGWSWLDRWVVAQPGQDTQSGMVPSQHAYAKSMANQPMSVGEITKLYTSRGPIHHNSKPSPAGQKLSRPPSHRSRSTPPQKVPPVSSTSTKVRAPSPKSSSWGRDDDLRSATSSQSQQYRRHTISGSSFRDDESFRSSSAISTCTVPTKSAKTKSRMESSSLSADKNGTSEKGSSNVKKRLSFTDSSPARLRNHSGPLKEDLLASATKKKVANGRR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3478 498 MobiDBLite consensus disorder prediction 332 498 - -
Acco02g3478 498 Gene3D iswi atpase 126 153 - -
Acco02g3478 498 SMART iq_5 128 150 IPR000048 GO:0005515
Acco02g3478 498 PANTHER IQ-DOMAIN 5-RELATED 15 479 - -
Acco02g3478 498 MobiDBLite consensus disorder prediction 258 277 - -
Acco02g3478 498 MobiDBLite consensus disorder prediction 388 473 - -
Acco02g3478 498 ProSiteProfiles IQ motif profile. 129 157 IPR000048 GO:0005515
Acco02g3478 498 MobiDBLite consensus disorder prediction 332 379 - -
Acco02g3478 498 Pfam IQ calmodulin-binding motif 131 150 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3478 Acco-ChrAcco02 48863874 48869646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3478 15 481 IQD Protein Family AT5G03040 41.929 2.22e-97 300