Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3473 ATGACAATGGAAATGGACTACAAAATCAAGACCACTTCACCATCTTCCTCCTCCTCTCCTCCTCCGCCACCTCCACCATCACAACCACAATCGCCGCCGTCGCCGGTGGTGGTTTCTCCTTGCGCTGCCTGCAAGATCCTCCGCCGTCGCTGCGTCGAGAAGTGTGTTCTGGCTCCGTATTTCCCGCCGACCGATCCGCTCAAGTTCACCATTGCTCACAGAGTCTTCGGAGCCAGCAACATCATCAAGTTCTTGCAGGAGCTTCCAGAATCACAGAGAGCAGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCAAGGATAAGGGACCCAGTGTACGGGTGTGCAGGAGCCATATGTCAGCTTCAGAAGCAAGTGAGCGAGCTGCAAGGTCAGCTAGCCAAGGCTCAAGCCGAGCTGGTCAACATGCAGTGTCAGCAAGCCAATTTGGTGGCTCTCATTTGCATGGAAATGAGCCAATGTCACCACCCATTATCTTCAGAGCCCCATCACTCCATGATAGCAGCAGCTCAGTCGCCGGCTCAGCCGCCACAGCATCATGAAGACATGAGCTGCTTGTTCGATGATAATAACAACATCAACAACAACTTCAGCTCGGCTTGGGGGGCTTGGGAGCCTCTTTGGACATGA 651 0.533 MTMEMDYKIKTTSPSSSSSPPPPPPPSQPQSPPSPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQAELVNMQCQQANLVALICMEMSQCHHPLSSEPHHSMIAAAQSPAQPPQHHEDMSCLFDDNNNINNNFSSAWGAWEPLWT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3473 216 ProSiteProfiles LOB domain profile. 39 140 IPR004883 -
Acco02g3473 216 MobiDBLite consensus disorder prediction 1 15 - -
Acco02g3473 216 MobiDBLite consensus disorder prediction 16 34 - -
Acco02g3473 216 MobiDBLite consensus disorder prediction 1 34 - -
Acco02g3473 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 39 184 - -
Acco02g3473 216 Pfam Lateral organ boundaries (LOB) domain 40 137 IPR004883 -
Acco02g3473 216 Coils Coil 119 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3473 Acco-ChrAcco02 48787435 48789245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3473 36 216 AS2 family AT1G07900 63.243 3.58e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco02g3473 LOB 4.8e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g3473 02 48787435 48789245 Acco02g3473 02 48787435 48789245 ECH