Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3465 ATGAAGGTGGAAGCTCACCACTTTGCCGTCAATAGAGGGAGCTTGATTCAACGGAGATCCTGCAACTCCAAACGATCCGGAACTAATCGTCGCCAGTTGAGTACTGCGAGTGCGCTTTTCTTTTCTAGAACGATCTCTCGTCGGCGGGATCTTGTCGCGGTTCTTGAGGTTGAGGCTTCAACCCTTCAGGCTCCGTGGTGGTACAGCTTCACAGCAGATCCATATACAGCCATGTCTGCAAACACAAGTTGCGATGTTTACATAGGCAATCTAGATGAGAGGGTCACGGAGAGGATCTTATATGATATATTAATTCAAGCAGGACGAGTGGTGCACCTGCATATTCCTAGAGATAAGGAATCTGATAAACCTAAAGGGTTCGCTTTTGCAGAATATGAAAGTGAGGAGATTGCAGATTATGCTATCAAGCTTTTCTCAGGCCTTGTGACACTCTACAAGAGAACACTGAAGTTTGCGAAATCTGGCCAAGACAAAGCTACTCCAAATGGTTCTGCAGTCGCTACACCGGCATCAAATTCTTCTAACCGGTCAAGGCCCCACCCTGTGCCAATAAATACTACCGAAATTTCTCCGCATTCTGCTAGGTTACTAACACCTAGCCGAATTTCAGATTACCCAGTCAATTACTCCCAAGTTACCCGCCAAGTAGTTGACCAATCTAGTGAGCATGGATCTCTCTACAATAACAACGATTATGAAAACAGCCGGAGAGTTTTTGAGCCGACATTGGATAGCTTTAGCCGGTATGGGTCACGCCGTTATGATACAAATAACCCAATCCCTTTCCCACATTACTAA 819 0.4567 MKVEAHHFAVNRGSLIQRRSCNSKRSGTNRRQLSTASALFFSRTISRRRDLVAVLEVEASTLQAPWWYSFTADPYTAMSANTSCDVYIGNLDERVTERILYDILIQAGRVVHLHIPRDKESDKPKGFAFAEYESEEIADYAIKLFSGLVTLYKRTLKFAKSGQDKATPNGSAVATPASNSSNRSRPHPVPINTTEISPHSARLLTPSRISDYPVNYSQVTRQVVDQSSEHGSLYNNNDYENSRRVFEPTLDSFSRYGSRRYDTNNPIPFPHY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3465 272 CDD RRM1_SF3B4 86 160 IPR034158 -
Acco02g3465 272 SUPERFAMILY RNA-binding domain, RBD 66 149 IPR035979 GO:0003676
Acco02g3465 272 MobiDBLite consensus disorder prediction 162 204 - -
Acco02g3465 272 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 84 163 IPR000504 GO:0003723
Acco02g3465 272 SMART rrm1_1 85 159 IPR000504 GO:0003723
Acco02g3465 272 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 78 267 - -
Acco02g3465 272 Gene3D - 76 171 IPR012677 -
Acco02g3465 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 86 156 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3465 Acco-ChrAcco02 48684606 48689106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3465 83 149 Eukaryotic Initiation Factors Gene Family AT4G34110 31.343 7.43e-06 45.1