Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3456 ATGCCAACACCACCACCAACCGCACCGTTTGGTCCTCCTCAAGAAACCCCCAATGCACGCTCCTCTCCTCCTCCTTTATTATCTTCTTCTTATCCAATCACTCTCAAGTTCCAGGACGTGGGATACAGAGTAAAGGTGGACAGAAAGAAAGGAGGGATTAACATAAAGCGAATGATCTCGTCCATGTCAGTCGACGGGGGAGCCACCACCGCGGCGACGCAAGAGAAAAACATTCTGAACGGCGTGACGGGGATGGTGTCTCCGGGAGAAATCCTGGCGGTGCTGGGCCCATCGGGGAGCGGGAAATCGACGCTCCTAAACGCACTCGCCGGGAGACTCGGCCAAGGCCAGGGACTCACCGGAACAATCCTCGCCAACGGATGCAAACTCAGCAAACCGGTTCTCCGGCGAACCGGGTTCGTGACCCAAGACGACGTGCTTTACCCTCATCTAACGGTCCGAGAGACTCTGATCTTCTGCTCACTCCTCCGGCTCCCGAGAACACTCTCGAAAGCGGAGAAGATATCGGTCTGCGACTCGGTGATCGCTGAGCTGGGACTAGTGAAATGCGAAAACACCATCATCGGAAACGCGTATATAAGAGGTGTTTCTGGAGGGGAAAGGAAGAGGGTGAGTATAGGTCATGAGATGTTGATGAATCCGAGCTTGTTGATACTGGACGAGCCGACGTCGGGGTTGGACTCGACAGCGGCGCACAGGCTGATGACGACGCTGACGACGGTGGTGGCGCAGCAGAAAGGGAAGACGGTGGTGGCGTCGATACACCAACCGTCGAGTAGAGTGTTTCAGATGTTTGATAAGATTTTGGTGTTATCGGAGGGACAGTGTTTGTATTTTGGCAAAGGAAGTGAAGCGATGAGCTATTTTGAAACGCTTGGGGTTAAACCGTCTTTTCCCATGAACCCCGCCGACTTTCTGCTTGATCTCGCTAACGGTGTTTGGCATCAGGCTGATAGTAGTGTAAGTGAAAGAGAAAGGCCACATAATATAAAGCAAACCCTAGTCCAATCTTACAACACCATTCTAGCTCCCAAAGTCCAAGAAGCGATATTGAACAACACAGACACTTCAACAAAACACACTCTTCAGCAACAACAAACCCCAAAAATCACCAATCCCAAAGATGGAAGAAGTTATATTAAGTTCAAGAACATGAACTTTACAATCTCCCTCTCTAATTGGTTCAACCAGTTCAGCGTCCTCCTCCAGAGAAGTCTGAAAGAACGAAAGCACGAATCCTTCAACCCGCTCAGAGTCTTCCAGGTGGTGGCGGCCGCCCTCCTTGCTGGCCTCATGTGGTGGCATTCTGATTATGGGGACGTCCAAGACCACCTCGGCCTCCTCTTCTTCATCTCCATTTTCTGGGGTGTGTTTCCTTCCTTCAACTCCGTCTTCGCCTTCCCACAAGACCGTGCCCTCTTCGTCAAGGAGCGAGCCTCTGGCATGTACACTCTCTCACCTTACTTCACTGCCCGTATCGTCGGCGACCTCCCCATGGAGCTCCTCCTCCCCTTCATCTTCCTCACCATCACCTACTGGATGAGCGGCCTCCGGCCAGACCTATGGTCTTTCCTACTAACCGTACTCGTTGTCCTCTTCTATGTCCTCGTCTCTCAGGGGCTCGGCCTTTTCCTTGGCGCCGCCATAATGGACGCCAAGCAGGCCTCCACTGTGGCCGCCGTGGTGATGCTAGGGTTCGTATTGATCGGCGGGTATTACGTGCACAAGGTGCCTTCATGCATGGGGTGGCTCAAGTATGTGTCAATGACTTTTTATTGTTACAGGCTTCTGATTTATATTCAGTATGGTGATGGTAAGAGAATCGCAGACTTTCTGGGTTGTGTTAACAATGGAGGGATTATTACTAGTGACAGAGGACACTGTAAGTTTGTGGAACAAGACTTGCTGGGTCAGATAAGCCCTTGGGTTTGTTTTGGGGCTTTGGTTTTTATGTTTGTGGGTTACAGAATGTTGGCTTATTTAGCATTGAGGAAGATCAAGACTTGA 2028 0.5108 MPTPPPTAPFGPPQETPNARSSPPPLLSSSYPITLKFQDVGYRVKVDRKKGGINIKRMISSMSVDGGATTAATQEKNILNGVTGMVSPGEILAVLGPSGSGKSTLLNALAGRLGQGQGLTGTILANGCKLSKPVLRRTGFVTQDDVLYPHLTVRETLIFCSLLRLPRTLSKAEKISVCDSVIAELGLVKCENTIIGNAYIRGVSGGERKRVSIGHEMLMNPSLLILDEPTSGLDSTAAHRLMTTLTTVVAQQKGKTVVASIHQPSSRVFQMFDKILVLSEGQCLYFGKGSEAMSYFETLGVKPSFPMNPADFLLDLANGVWHQADSSVSERERPHNIKQTLVQSYNTILAPKVQEAILNNTDTSTKHTLQQQQTPKITNPKDGRSYIKFKNMNFTISLSNWFNQFSVLLQRSLKERKHESFNPLRVFQVVAAALLAGLMWWHSDYGDVQDHLGLLFFISIFWGVFPSFNSVFAFPQDRALFVKERASGMYTLSPYFTARIVGDLPMELLLPFIFLTITYWMSGLRPDLWSFLLTVLVVLFYVLVSQGLGLFLGAAIMDAKQASTVAAVVMLGFVLIGGYYVHKVPSCMGWLKYVSMTFYCYRLLIYIQYGDGKRIADFLGCVNNGGIITSDRGHCKFVEQDLLGQISPWVCFGALVFMFVGYRMLAYLALRKIKT 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3456 675 CDD ABCG_EPDR 63 287 - -
Acco02g3456 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 667 - -
Acco02g3456 675 MobiDBLite consensus disorder prediction 1 20 - -
Acco02g3456 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 298 IPR027417 -
Acco02g3456 675 MobiDBLite consensus disorder prediction 1 27 - -
Acco02g3456 675 Pfam ABC-2 type transporter 404 609 IPR013525 GO:0016020|GO:0140359
Acco02g3456 675 SMART AAA_5 88 282 IPR003593 GO:0016887
Acco02g3456 675 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 305 IPR003439 GO:0005524
Acco02g3456 675 Gene3D - 67 300 IPR027417 -
Acco02g3456 675 Pfam ABC transporter 79 231 IPR003439 GO:0005524
Acco02g3456 675 FunFam ABC transporter G family member 22 67 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3456 Acco-ChrAcco02 48590116 48598647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3456 77 298 Calmodulin-binding Proteins AT2G36910 28.319 1.16e-12 69.7