Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3444 ATGGCAACAGCAACGGCAACAGCAACATATCCGCCACCGCCGCCCTATTACAGACTCTACAAAGATTATTTACAAGACCCTAAATCAGCTCCAGAACCTCCCCCTCCTATAGAAGGGACTTATGTTTGTTTTGGAGGCACTTACACTACTAATGACACCCTACCAAGTTTGGAAGAGCAGGGAGTACGCCAACTCTATCCCAAGGGCCTTGATGTTGATTATAAGAAGGAGTTGAGATCACTTAACGGAGACTTGCAGCTTCACATTTTGGAGCTTGCTGATATTCTCATAGAGAGACCATCACAATATGCTAGGAGAGTAGAAGAAATATCTCTCGTATTCAAGAACTTGCATCACCTTCTAAACTCAATGCGCCCCCATCAGGCAAGAGCAACATTGATTCACATCTTAGAACTTCAAATACAGCGTCGTAAACAAGCAGTGGAGGACATAAAGAGGAGGAGAGAGGAGGCACGGAGACTTCTTAATGAGGCCCTAACAACACTAGATGGCAACTAG 519 0.4489 MATATATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGTYTTNDTLPSLEEQGVRQLYPKGLDVDYKKELRSLNGDLQLHILELADILIERPSQYARRVEEISLVFKNLHHLLNSMRPHQARATLIHILELQIQRRKQAVEDIKRRREEARRLLNEALTTLDGN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3444 172 Coils Coil 134 168 - -
Acco02g3444 172 Gene3D - 67 163 IPR044888 -
Acco02g3444 172 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 3 171 IPR009244 GO:0003712|GO:0006357|GO:0016592
Acco02g3444 172 SUPERFAMILY Mediator hinge subcomplex-like 72 163 IPR037212 GO:0016592
Acco02g3444 172 Pfam MED7 protein 8 162 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3444 Acco-ChrAcco02 48460944 48463368 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Acco02g3444 Med7 1.9e-41 No_clan