Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3423 ATGGAAGATCCAGAGGAAGAAGAGCTTCTGAATCTCAGCCTCTCAGTTTCTGCAGGTAGATCATCAGAAAGAAAAAAGAAAGGCAAGATGTTGATGAATCATCATCACCATCTTCTTCACCAGTACGAACAAGCAGGCTTCGAAGGCAAGATCTTCAGGCTTCTCCAAACCAGAGAACAGATGCTTCGTTCAGATCACAATCTCATGATGATGATGAGAAATAATCGAACTCGAGGTGGTGGAGGTGGATTAGATCAGGATGGTAGTAATAATAATAATAATAATGGCCTCCCTCTGATTCATCTTCTTCTCAGTACGGCCACTTGCGTCGATGACGCCAACTTCAACACTGCCCTAGATAACCTCACTCAGCTTTACCAAACTGTCTCCCTCACCGGCGACTCTGTCCAGCGAGTGGTGGCTTACTTCGGCGATGGCCTCGCCGCCCGTCTGCTCACTAGAAAATCCCCCTTCTACGACATGCTTATGGAAGAACCGACGAGCGAGGAAGAGTTCTTAGCCTTCACTGACCTTTATAGAGTGTCGCCTTACTACCAATTCGCCCACTTCACGGCGAACCAAGCCATCCTCGAGGCATTCGAGAACGAGGAAGACAAGAACAACAAAGCATTACACGTCATCGACTTCGATGTCTCTTATGGTTTCCAATGGCCCTCACTCATCCAATCTCTCTCGGAGAAGGCCACCGCCGGCAGCAGAATATTCCTCCGAATCACCGGTTTCGGGAAGAATCTCAAAGAGCTTCAAGAAACAGAATCTCGCCTGGTCAGCTTCTCCAAGGGATTCACCAATTTAGTGTTTGAATTCCAAGGTCTTCTTGGAGGATCGCGAGTGATTAACCTGAGGAAGAAGAAGAATGAAACAGTGTGTGTTAATCTGGTTTCATACTTGAACACATTGAGTAGTTTCATGAAGATTTCTGACACATTGGGTTTTGTTCATTCTCTTAATCCCTCCATTGTTGTTCTTGTGGAGCAAGAAGGAAGTCGAAGCCCAAGAACGTTCTTGTCCAGATTCACCGATTCGTTGCATTATTTCGCCGCCATGTTTGATTCTCTTGATGATTGCTTGCCCGTGGAAAGTACAGAGAGGTTGAGGATTGAGAAGAAGCTTCTAGGGAAAGAGATTAAGAGTATGTTGAATTACTATGACGTGGACGGTGTGGATTGTCCCAAGTATGAGAGGATGGAGACATGGAAGGCTAGGATGGAGAGCCATAGGTTTAGTGGAACCAAAGTGAGTTCAAAGGCTTTGATTCAGGCCAAGTTGCTTTTGAAGATGAGGACTCATTATTCGCCGCTTCAGTTTGAAGACGATGGAGGTGGCGGCGGTTTCAGGGTTTCGGAGAGAGACGAAGGAAGAGCGATTTCTTTGGGATGGCAAAATAGGTTTCTTCTTACAGTCTCGGCATGGCAGACAGAAGTGTGA 1449 0.4631 MEDPEEEELLNLSLSVSAGRSSERKKKGKMLMNHHHHLLHQYEQAGFEGKIFRLLQTREQMLRSDHNLMMMMRNNRTRGGGGGLDQDGSNNNNNNGLPLIHLLLSTATCVDDANFNTALDNLTQLYQTVSLTGDSVQRVVAYFGDGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEDKNNKALHVIDFDVSYGFQWPSLIQSLSEKATAGSRIFLRITGFGKNLKELQETESRLVSFSKGFTNLVFEFQGLLGGSRVINLRKKKNETVCVNLVSYLNTLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPVESTERLRIEKKLLGKEIKSMLNYYDVDGVDCPKYERMETWKARMESHRFSGTKVSSKALIQAKLLLKMRTHYSPLQFEDDGGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQTEV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3423 482 ProSiteProfiles GRAS family profile. 90 479 IPR005202 -
Acco02g3423 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 87 474 IPR005202 -
Acco02g3423 482 Pfam GRAS domain family 99 479 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3423 Acco-ChrAcco02 48111845 48113293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3423 91 479 GRAS Transcription Factor Family AT1G14920 34.080 7.64e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco02g3423 GRAS 8.8e-89 CL0063