Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3414 ATGGCTGCTTCAACTTCTTCCTCTGCTTTTTCTCACAAATCCTGGAATCCCTCCTCCGGTTCACCCCCACCAATTTCTCTCACCGCCGATCAGCTCAAGCATTGTAATGAAGCGCTTGCCAGCTTTAGGTCGAGAACGCCGGAGATGATCGATCAAGAGTTCGCACACTTGGAGGCCAATGTGATAACACTAAATGAGCTGAGGAGAAGATGCACTGTAGCTCTAAATGACGTAAATCTGCACAAAAATCGATACCCGGAAGTTGTCCTGCCATTTGACGATAACAGGGTTGTTCTGGAATCAAGTTCAGATCATAGACCTACGGCCATGGGATATGTCAATGCAAGCTTTCTCTCGGTCTCTTCCTCTGAGAGTGTTTCTATGTTTATAGCTACACAAGGTCCACTGCCACATACTTGTGAGGATTTCTGGGAAATGGTAATCCAATACCGTTGCCCCGTCATTGTGAACCTCACTGCTCTCCTTGAACACAACAAGATTGTGAAGTGTGACGATTATTTTCAAGCTGAGGGTGAACCTATGAAATTTGGTAACATCTCTGTTGTTTGTGAGTGGATGAAAATTGTTGAAAACTCATTGGTACTGCGCCATTTGAAGGTGTATAGAAAGGAAGATCCTCCCTTTTCTGTTTTGCACATTCATTATCCTGAGTGGCCTGACTATGGAGTTCCCAACGATACACTTGCTGTTCGTGCAATTTTTAAGAGATTGTACCATTTACCATCAAAACTTGGCCCAATAGTGGTGCATTGCAGTGCAGGTATTGGAAGAACTGGAGCATACTGTGCTGTTCACAATACAATTCAGAGAATCCTTGTTGGTGATAAGTCTGCCTTGGATCTCTGTAATACCATATTTGTCTTCAGGTCGCAGCGATATGGAATGGCTCAGAGACAGAGTCAGTACAATTTCTGCTATGAAGCTATAGTAGAGGCACTGGATGAACTTGTTTCTAATCATCATCAGCAATGA 993 0.4371 MAASTSSSAFSHKSWNPSSGSPPPISLTADQLKHCNEALASFRSRTPEMIDQEFAHLEANVITLNELRRRCTVALNDVNLHKNRYPEVVLPFDDNRVVLESSSDHRPTAMGYVNASFLSVSSSESVSMFIATQGPLPHTCEDFWEMVIQYRCPVIVNLTALLEHNKIVKCDDYFQAEGEPMKFGNISVVCEWMKIVENSLVLRHLKVYRKEDPPFSVLHIHYPEWPDYGVPNDTLAVRAIFKRLYHLPSKLGPIVVHCSAGIGRTGAYCAVHNTIQRILVGDKSALDLCNTIFVFRSQRYGMAQRQSQYNFCYEAIVEALDELVSNHHQQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3414 330 Gene3D Protein tyrosine phosphatase superfamily 25 326 IPR029021 -
Acco02g3414 330 ProSiteProfiles PTP type protein phosphatase domain profile. 50 319 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 SMART PTPc_3 49 321 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 FunFam Tyrosine-protein phosphatase non-receptor type 12 29 327 - -
Acco02g3414 330 ProSitePatterns Tyrosine specific protein phosphatases active site. 256 266 IPR016130 GO:0016311|GO:0016791
Acco02g3414 330 SMART ptp_7 216 318 IPR003595 -
Acco02g3414 330 PRINTS Protein tyrosine phosphatase signature 111 118 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 PRINTS Protein tyrosine phosphatase signature 215 232 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 PRINTS Protein tyrosine phosphatase signature 302 312 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 PRINTS Protein tyrosine phosphatase signature 129 149 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 PRINTS Protein tyrosine phosphatase signature 253 271 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 PRINTS Protein tyrosine phosphatase signature 286 301 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 MobiDBLite consensus disorder prediction 1 27 - -
Acco02g3414 330 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 237 310 IPR000387 GO:0016311|GO:0016791
Acco02g3414 330 MobiDBLite consensus disorder prediction 1 26 - -
Acco02g3414 330 Pfam Protein-tyrosine phosphatase 79 318 IPR000242 GO:0004725|GO:0006470
Acco02g3414 330 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 28 321 - -
Acco02g3414 330 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 42 321 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3414 Acco-ChrAcco02 47919505 47925305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3414 30 326 Protein tyrosine phosphatase (PTP) family AT1G71860 59.801 8.17e-130 372