Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3413 ATGGCTGCTTCAACTGCTTACTCTGCTTTTTCTCACAAACCCTGGAATCCCTCCTCTGATTCACCGCCACCAATTTCTCTCACCGCCGATCAGCTCAAGCACTGTAATGAAGCGCTTGCCAGCTTTAGGGCGAGAACGCCGGAGATGATCCATCAAGAGTTCGCACACTTGGAGGCCAATGCGATAACACTAAGTGAGCTGAGGAGAAGATGCACTGTAGTTCTAAATGACGTAAATCTACACAAAAATCGGTATCCGGAAGATGTCCTGCCATGGTTGTTCTGGAATCAAGTTCAAGATCATAGACCTACGGCCATGGGATATATCAACGCAAGCTTTCTCTCGATCTCTTCCTCTGAGAGTGTTTCTATGTTTATAGCTACACAAGGTCCGCTGCCACATACTTGTGAGGATTTCTGGGAAATGATAATCCAATACAGTTGCCCCGTCATTGTGAATCTCACTGCGCTTGTTGAATCCAACAAGATTGTGAAGTGTGACGATTATTTTCAAGCTGAGGGTGAACCTATGAAGTTTGGTAACATCTCTGTTGTTTGTGAGTGGATGAAAACTGTTGAAAACTCATTGGTACTGCGCCATTTGAAGGTGTATAGAAAGGAAGATCCTCCATTTTCTGTTTTGCACATTCATTATCCTGAGAGGCCTGACCATGGAGTTCCCCACGATACACTTGCTATGCGTGCAATTTTTAAGAGATTGAACCATATACCACCAAAACTTGGCCCAGTAGTGGTGCATTGCAGCTTAGCTCACATTTATTTATTCAGTATTGGAAGAACTGGAGCATACCGTGCTGTTCACAATACAATTCAGAGAATCCTTGTTGGTGATAAGTCTGCCTTGGATCTTTATAATACCTTATTTGTCTTCAGGTCGCAGCGATATGGAATGGCTCAGAAACAGAGCCAGTACAATTTCTGCTATGAAGCTATAGTAGAGGCACTGGATGAACTTGTTTCTAATCATCATCAGCAATGA 999 0.4344 MAASTAYSAFSHKPWNPSSDSPPPISLTADQLKHCNEALASFRARTPEMIHQEFAHLEANAITLSELRRRCTVVLNDVNLHKNRYPEDVLPWLFWNQVQDHRPTAMGYINASFLSISSSESVSMFIATQGPLPHTCEDFWEMIIQYSCPVIVNLTALVESNKIVKCDDYFQAEGEPMKFGNISVVCEWMKTVENSLVLRHLKVYRKEDPPFSVLHIHYPERPDHGVPHDTLAMRAIFKRLNHIPPKLGPVVVHCSLAHIYLFSIGRTGAYRAVHNTIQRILVGDKSALDLYNTLFVFRSQRYGMAQKQSQYNFCYEAIVEALDELVSNHHQQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3413 332 ProSiteProfiles PTP type protein phosphatase domain profile. 50 321 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 SMART PTPc_3 49 323 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 32 323 - -
Acco02g3413 332 SMART ptp_7 212 320 IPR003595 -
Acco02g3413 332 Pfam Protein-tyrosine phosphatase 79 320 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 PRINTS Protein tyrosine phosphatase signature 125 145 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 PRINTS Protein tyrosine phosphatase signature 288 303 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 PRINTS Protein tyrosine phosphatase signature 304 314 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 PRINTS Protein tyrosine phosphatase signature 211 228 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 PRINTS Protein tyrosine phosphatase signature 249 267 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 PRINTS Protein tyrosine phosphatase signature 107 114 IPR000242 GO:0004725|GO:0006470
Acco02g3413 332 MobiDBLite consensus disorder prediction 1 23 - -
Acco02g3413 332 Gene3D Protein tyrosine phosphatase superfamily 24 328 IPR029021 -
Acco02g3413 332 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 234 312 IPR000387 GO:0016311|GO:0016791
Acco02g3413 332 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 33 323 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3413 Acco-ChrAcco02 47897896 47908735 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3413 30 328 Protein tyrosine phosphatase (PTP) family AT1G71860 55.375 5.90e-116 337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g3413 02 47897896 47908735 Acco02g3413 02 47897896 47908735 ECH