Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3412 ATGGCTGCTTCTTCATCGGGAAATTCCATTTCTAATTCTTCCTCTTCTTTATCTAACAAACCGTTGGCATTCTCCCCCGATTTTCCCCCGGGAATCTCTCTCACCCCCGATCAGCTCAAGTACTGCTCCGAAGCGCTGGCCATCTTCAGGGAGAAGCTTCAGACGCCGTACAGGATCAGTCAAGAGTTTGCTCAATTGCAGGCCAATAGGATAACGCCGAGTGAGATGAGGAGAAGATGCACTATAGCTCTAAATGATGTAAATGTGAGCAAAAATCGGTATACAAATGTCCTACCATTTGATAACAACAGAATTGTTCTTGAATCAAGTCCAGATTATAGACCTGCAGCCAAGGGATATATCAATGCTAGCTTCATCTCGATCTCTTCCCCTGGAATTGTTTCTCAGTTTATAGCTACACAAGGTCCACTACCACATACTTATGAGGATTTCTGGGAAATGGTGATCCAATACCGTTGCCCTGCTATTGTAATGCTCACTAGGCTTGTCGACAATTATAAGATGGTAAAATGTGGAGATTATTTCCAAGCTGAAGATGGACCTAGAGAGTTAGGTAATATCTCTATTATTGGCAAATGGATGAAAACTACTGAAACATCACTAGTACTACGCCATTTGGAGGTGAAGCATAGAGAGGAAGAAGAGCCGCCCTTGTCTGTTTTGCATATTCAGTATCCTGAATGGCCTGATCATGGAGTCCCCGAAGATACATATGCTGTGCGTGACATTTTGAAAAGATTGTACCATGTCCCACCAAACCTTGGCCCAACTGTGGTGCACTGCAGTGCAGGTATTGGCAGGACCGGAACATTCTGTGCAATTCACAACACAATTCAGAGAATCCTTGCTGGTGATAGGTCTGCCTTGGATCTTGGTAATACCATAGCTGCCTTCAGGTCACAGCGTATTGGAATGGTTCAGACACAGGATCAGTACTTTTTCTGCTATAAAGCTATCGTAGAGGAACTGGAAGACCTTGTTTCTCATCAGCAATGA 1017 0.4395 MAASSSGNSISNSSSSLSNKPLAFSPDFPPGISLTPDQLKYCSEALAIFREKLQTPYRISQEFAQLQANRITPSEMRRRCTIALNDVNVSKNRYTNVLPFDNNRIVLESSPDYRPAAKGYINASFISISSPGIVSQFIATQGPLPHTYEDFWEMVIQYRCPAIVMLTRLVDNYKMVKCGDYFQAEDGPRELGNISIIGKWMKTTETSLVLRHLEVKHREEEEPPLSVLHIQYPEWPDHGVPEDTYAVRDILKRLYHVPPNLGPTVVHCSAGIGRTGTFCAIHNTIQRILAGDRSALDLGNTIAAFRSQRIGMVQTQDQYFFCYKAIVEELEDLVSHQQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3412 338 PRINTS Protein tyrosine phosphatase signature 225 242 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 PRINTS Protein tyrosine phosphatase signature 119 126 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 PRINTS Protein tyrosine phosphatase signature 137 157 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 PRINTS Protein tyrosine phosphatase signature 263 281 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 PRINTS Protein tyrosine phosphatase signature 296 311 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 PRINTS Protein tyrosine phosphatase signature 312 322 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 ProSiteProfiles PTP type protein phosphatase domain profile. 59 329 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 SMART PTPc_3 58 331 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 FunFam Tyrosine-protein phosphatase non-receptor type 12 36 337 - -
Acco02g3412 338 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 40 332 - -
Acco02g3412 338 Gene3D Protein tyrosine phosphatase superfamily 35 337 IPR029021 -
Acco02g3412 338 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 248 320 IPR000387 GO:0016311|GO:0016791
Acco02g3412 338 Pfam Protein-tyrosine phosphatase 88 328 IPR000242 GO:0004725|GO:0006470
Acco02g3412 338 SMART ptp_7 226 328 IPR003595 -
Acco02g3412 338 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 39 331 IPR029021 -
Acco02g3412 338 ProSitePatterns Tyrosine specific protein phosphatases active site. 266 276 IPR016130 GO:0016311|GO:0016791
Acco02g3412 338 CDD PTPc_plant_PTP1 120 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3412 Acco-ChrAcco02 47877764 47889522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3412 37 335 Protein tyrosine phosphatase (PTP) family AT1G71860 70.234 1.81e-162 455