Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3408 ATGGGTCTCCGATCAATCCGAATTTTAACACTCTCCGCCATCTTCTTCGCTGCCATCTCCTCCTCCGCCGCTGCCATCTCTCCTGGTTCGACTCTCTTAGCTTCCAACACAAATCAAGCATGGTCTTCTACGAACAAAACATTCTCTCTCCATTTTGTTCCTTCCAACCCCCAAACCGAGCCTCCTACCTTCATAGCCGCCATCGTCTACTCTGGCGACGCCCCGGTAATCTGGTCCGCCGGTAATGCCTTGGCGGTGGACTCCGGCGGCTCCTTCCAGTTCCTTTCCAGCGGAACCCTTCGCCTTCTAAACGGGTCCGGGTCAATCGTTTGGGACTCCAGAACTTCAAATCTGGGTGTCTCCTCCGCTACCCTACAAGACGACGGCAACCTTGTGCTGTCAAACGGAACAACCACCGTCTGGTCAACCTTCGCCAATCCAACTGATACAATTGTTCCATCTCAAAACTTCACTACCGGTATGGTTTTGCGATCTGGGTTGTACTCGTTTAGTCTTATGTCAAGTGGAAATTTGACTCTTAAATGGAATAATAGTGTGGAATACTGGAATCAGGGTTTGAATGCGTCTGTGAATACAAAGTTAAATTCACCGGTTTTGATGTTGCAATCAATAGGTCTTTTGCAACTCTATGATTCTAATCTGTCAGCTCCAGCTGTTATTGCTTATAGTAGTGATTACGCTGAAGGTGGTGATGTGCTGAGAATTTTGAAGATAGATAATGATGGGAACCTGAGGATTTACAGTTCTTCAAGAAATAGTGGAACTGTAAGTGCAAGATGGGCTGCTGTAGCTCAATGTGAAGTTTTTGGTTACTGTGGGAACTATGGCATTTGCAGTTATAATGATACAGACGCAATCTGTGGGTGCCCGTCTCAGAATTTTGAGATGATTGATCCGAGTAATAGCCGAAAAGGATGTAGAAGGAAGGTGAACCTTAATGATTGTCCTGGAAATGCAACTATGTTGCAATTGGATCATACTCAGTTCTTGACTTATCCACCTGAGCTTAGTTCAGAAATATTTTTCATTGGTATATCAGCTTGTAGAGGTAATTGTCTCGCAGGTAGCTGCTTTGCTTCTACTTCGTTATCAGATGGCACAGGACAGTGTTACATAAAAACGTTGGATTTCATTAGCGGCTATCAAAGTCCTGCACTTCCTAGCACTTCATATGTCAAGCTTTGTGGACCAGTGGTTCCAAATCCTCCATCTTCCTTGGCTGGAGCTGAGAGGAAGCATCGTGGGAGGGTACCGGCTTGGATTGTGGTGTTAGTGGTTTTGGGTACCCTTTTAGCTTTGATTGCCTTTGAAGGTGGTTTATGGTTCTGGTGTTGCAGGAACAGAACAATACTAGGCGGATTATCTGCACAATATGCTCTTCTTGAGTATGCTTCTGGTGCACCGGTCCAGTTCTCGTACAAGGATCTCCAGCGGGCAACAAAAGGGTTTAAAGAGAAGCTTGGGGCTGGGGGATTTGGTGCCGTGTATAGAGGAGTCCTTGCTAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGAGAGAAACAGTTTAGGATGGAAGTAGCTACTATAAGCAGTACCCATCATCTCAATTTGGTGAGGCTGATCGGTTTCTGCTCAGAAGGGCGCCACAGGCTTTTAGTGTACGAGTTCATGAAAAACAGTTCGCTTGATAATCTACTGTTTTTGACAGAAGAACAGTCTGGAAAATTGTTGAATTGGGAGTACCGGTTCAACATTGCCCTTGGCACTGCAAGGGGAATCACGTATCTTCATGAGGAGTGTCGAGACTGCATTGTCCATTGTGATATAAAACCTGAAAACATTCTCTTGAACGAGAATTACATTGCTAAGGTATCAGATTTTGGCCTCGCGAAGCTTGTAAATCCAAAAGACCACAGGCACCGAACTCTGACGAGCGTGAGAGGGACACGAGGATATCTAGCTCCCGAATGGCTCGCCAATCTTCCCATAACTTCCAAATCCGACATATACAGCTATGGCATGGTTTTGCTGGAAATTGTGAGTGGAAGGAGAAACTTTGAACTGTTGGATGACAGAAACAGGAAAAAGTTCTCTGACTGGGCTTATCAAGAGTTTGAGAAAGGCAATATCATGGGAATACTTGACAAAAGACTAAATGACCAAGAAGTTGATATGGAGCAACTACAAAGGGCAGTTCAAGTAAGCTTCTGGTGCATACAGGAACATCCATCTCAGAGGCCAACAATGGGTCGGGTTGTGCAAATGCTCGAAGGGATAACCGAGATCGAGATGCCGCCTGCACCTAAATCCTCCATCGAAGGATCTGTCAGTGGGACGAGCACTCACTTGAGCAGCAATACTAGTGCCTTCTCCACTGTTCCCGCTTCAGCCCCAGGTACTGCTTCATCTTCCTCATTCCAGAACAATGGTGGCCCAAGTTTGACTTCAGGAAAAAACACTGAGAAGGCAACTTCCTCTCTTCTACAAGAAGACCAATTGTAA 2520 0.456 MGLRSIRILTLSAIFFAAISSSAAAISPGSTLLASNTNQAWSSTNKTFSLHFVPSNPQTEPPTFIAAIVYSGDAPVIWSAGNALAVDSGGSFQFLSSGTLRLLNGSGSIVWDSRTSNLGVSSATLQDDGNLVLSNGTTTVWSTFANPTDTIVPSQNFTTGMVLRSGLYSFSLMSSGNLTLKWNNSVEYWNQGLNASVNTKLNSPVLMLQSIGLLQLYDSNLSAPAVIAYSSDYAEGGDVLRILKIDNDGNLRIYSSSRNSGTVSARWAAVAQCEVFGYCGNYGICSYNDTDAICGCPSQNFEMIDPSNSRKGCRRKVNLNDCPGNATMLQLDHTQFLTYPPELSSEIFFIGISACRGNCLAGSCFASTSLSDGTGQCYIKTLDFISGYQSPALPSTSYVKLCGPVVPNPPSSLAGAERKHRGRVPAWIVVLVVLGTLLALIAFEGGLWFWCCRNRTILGGLSAQYALLEYASGAPVQFSYKDLQRATKGFKEKLGAGGFGAVYRGVLANKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNLLFLTEEQSGKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLNENYIAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDIYSYGMVLLEIVSGRRNFELLDDRNRKKFSDWAYQEFEKGNIMGILDKRLNDQEVDMEQLQRAVQVSFWCIQEHPSQRPTMGRVVQMLEGITEIEMPPAPKSSIEGSVSGTSTHLSSNTSAFSTVPASAPGTASSSSFQNNGGPSLTSGKNTEKATSSLLQEDQL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3408 839 Pfam D-mannose binding lectin 78 159 IPR001480 -
Acco02g3408 839 Gene3D Transferase(Phosphotransferase) domain 1 563 774 - -
Acco02g3408 839 ProSiteProfiles Bulb-type lectin domain profile. 17 146 IPR001480 -
Acco02g3408 839 MobiDBLite consensus disorder prediction 769 839 - -
Acco02g3408 839 Pfam Protein kinase domain 491 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3408 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 146 - -
Acco02g3408 839 SUPERFAMILY Protein kinase-like (PK-like) 471 763 IPR011009 -
Acco02g3408 839 SMART blect_4 32 147 IPR001480 -
Acco02g3408 839 ProSiteProfiles Protein kinase domain profile. 488 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3408 839 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Acco02g3408 839 Gene3D Phosphorylase Kinase; domain 1 461 562 - -
Acco02g3408 839 SMART serkin_6 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3408 839 PIRSF SRK 2 815 IPR024171 GO:0004674
Acco02g3408 839 CDD STKc_IRAK 494 765 - -
Acco02g3408 839 PANTHER OS07G0415500 PROTEIN 8 774 - -
Acco02g3408 839 Gene3D - 19 146 IPR036426 -
Acco02g3408 839 FunFam S-receptor-like serine/threonine-protein kinase 462 562 - -
Acco02g3408 839 ProSiteProfiles Bulb-type lectin domain profile. 148 266 IPR001480 -
Acco02g3408 839 MobiDBLite consensus disorder prediction 778 839 - -
Acco02g3408 839 Coils Coil 717 737 - -
Acco02g3408 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Acco02g3408 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 147 269 - -
Acco02g3408 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 563 772 - -
Acco02g3408 839 Gene3D - 147 269 IPR036426 -
Acco02g3408 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 192 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3408 Acco-ChrAcco02 47768441 47770960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3408 461 772 Receptor kinase-like Gene Family AT5G20050 44.923 2.29e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco02g3408 Pkinase 1.8e-51 CL0016