Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3379 ATGCAAATCATCTTCACTACTTCCTCACTCTCTCCTCCTTCAATGGATCAACCCCTCACCACCACCACCACCACCACTCCGGCAACCTACCGCGGTGTTCGCATGCGAAAATGGGGCAAATGGGTGTCCGAAATCCGGGAGCCCGGCAAGAAGAACCGGATATGGTTAGGGAGCTACGACACGCCGGAGATGGCTGCAGCTGCATACGACGTCGCAGCTTTACATTTTCGGGGCCAAGCTGCGCGGCTCAACTTCCCGGAGCTCATCGGCAGCCTACCCCTGCCGGCAACCTCCCGAGCTGAGGATGTGCAGATGGCAGCACAGCAAGCAGCATTGAAATTAAAGAGACCGGTGATCAGAGGACCGTCAGAGTCAGGCGGTGGTACTACACGTACGATGGCGGCACCGCCGGTGACGGTGGGGCTGTCACCAAGCCAAATTCAGGCTATAAATGAGTCACCACTGGATTCACCAAAGATGTGGATGCAAATGGCTGCTGAGGCTGCTCTTATGGTAGGGTTTGATGTATTGTGCAATGGCTATGACGAGTATGATGAATTAGAAGAAACGCAGCATCATGAACCTATATGGGACTTCCGATAA 603 0.5406 MQIIFTTSSLSPPSMDQPLTTTTTTTPATYRGVRMRKWGKWVSEIREPGKKNRIWLGSYDTPEMAAAAYDVAALHFRGQAARLNFPELIGSLPLPATSRAEDVQMAAQQAALKLKRPVIRGPSESGGGTTRTMAAPPVTVGLSPSQIQAINESPLDSPKMWMQMAAEAALMVGFDVLCNGYDEYDELEETQHHEPIWDFR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3379 200 CDD AP2 30 88 IPR001471 GO:0003700|GO:0006355
Acco02g3379 200 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Acco02g3379 200 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Acco02g3379 200 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Acco02g3379 200 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Acco02g3379 200 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Acco02g3379 200 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Acco02g3379 200 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 24 133 - -
Acco02g3379 200 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Acco02g3379 200 PRINTS Ethylene responsive element binding protein signature 68 88 IPR001471 GO:0003700|GO:0006355
Acco02g3379 200 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3379 Acco-ChrAcco02 47328165 47328767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3379 27 184 AP2-EREBP Transcription Factor Family AT1G71450 52.532 3.04e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g3379 AP2 3.4e-13 CL0081