Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3346 ATGGCAGATATTACTCCGACGACGTCTCTAAAACTCTTTGGCATTAACATTCACAAAGTTGCAGAATCCGATCAGGACGCTTTGAACTCCGGCGGCAACGATCACCGAAAATACGAGTGCCAGTATTGCTGCCGTGAGTTTGCTAATTCACAAGCGTTGGGAGGTCACCAAAACGCGCACAAGAAAGAAAGACAGCTTCTAAAGCGAGCTCAAATGCAAGCTGCTCGAACTGCTTTTTGTGCTTCACATCACAGTTATATTCATCACAACCCTATCTTATTGCCTCCACCTAATATCCTCGCCGGATCGCCGCCTCCTCCACCGCCTCCGCAGTATCCGTGGCCGCACAGTGTACCACATAACCCACCGTCTCCGGTGTATCATTCTGAGACATCAGGTGTGTGTGTGAATTCTGGTTTTTCAGGTTTGCATGATCATCCTTCATCACGGCCCTCACCTATGGCGGTATATGGTAGCTTTACGGGCAGTGATGGTGGAGAACGAGGCTTCAGTTTGGATTTGCAACTTAGTCTATGA 537 0.486 MADITPTTSLKLFGINIHKVAESDQDALNSGGNDHRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARTAFCASHHSYIHHNPILLPPPNILAGSPPPPPPPQYPWPHSVPHNPPSPVYHSETSGVCVNSGFSGLHDHPSSRPSPMAVYGSFTGSDGGERGFSLDLQLSL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3346 178 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Acco02g3346 178 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Acco02g3346 178 PANTHER ZINC FINGER PROTEIN 5 7 178 IPR044299 GO:0010090
Acco02g3346 178 Gene3D Classic Zinc Finger 22 89 - -
Acco02g3346 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3346 Acco-ChrAcco02 46480316 46480852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3346 5 107 C2H2 Transcription Factor Family AT1G67030 57.658 1.07e-30 108