Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3339 ATGAATATTCCTTGTGATTTTCCCCATTGTTCCATCTTCTTCTTCCTTCTGCAGCTACTTGTCATTATTATAACAGTTGGCGCCGATGATGATAACAACTTCAGAAAGTGCAGTAGCTTCTTCAGCTGCGGAAACGTCAATAACGTTGGTTATCCATTCTGGGGAGACAACAGAGCTTCATACTGCGGTCAGCCTGATTTCAGACTTGCTTGCCAAGACGATACACCAAAGTTGATCGTTAATAATTCTGTCACTTATCGGATTCTGAGTTTGAGCTTAAATAATCAGAGTCTTAAAGTGGTTAGGGATGATTATTGGAAAACTATATGTCCAAGTCAATACACAAACACTACTAGCTTTGATTCCACCACCACCATGCTCAAGCTTGCCGATGGGTTTCAAAACATGGCCTTGCTATATGATTGCCTCAACATTTTTAATCCAATGGGTCGGTTCATCACTACAGCTACCACAGTTTGCTCCAAACAAAACGTCTACTATGGGAGCGTACCTTTCAGTATGGATCTGACAGGAATTTGCGAGGTTGTTGTTATTCCTATAGAGTCTGATTTTGTTGATTTGGTACTTCGCTCTCAAAAGGGAATTGAAGATGCAATAGAGCAAGGTTTTGTATTAAGATGGAGTGTGGATATTGAAGAGTGTGACAAGTGTGTTATGTCTGGTGGGGAGTGTGGGTATATGAATCACAACTTCACATGTTTCTGCAACAATGGGACTCAAGGAACTACGTGTTCTTCAGGCATTGGTGTTGGAGTTGGAGCTTTTTGTGGCGTTCTTATTTTATGTTTGATGTATTTGGTCATGAAGAGAAGGAAGAGAAAAGTTGAACAGTTGAACAGCGATAAGAACCTCTTGTCGCCTTCATTAAGCAGTATTAATGGCGATGTAACAAAAAGCTCTGCAACTAAAACTAGTATGGCTCAAAGTGCTCCTTCTTACCCTGCTGCCTCCAAGTTTAGCTCTGTGCAGAAGAGTTTTTACTTCGGAGTTCAAGTTTTTAGCTACGATGAACTTGAAGAAGCTACAAAAAATTTTGACCCTTCCATGGAACTTGGTGATGGAGGCTTCGGAACTGTTTATTATGGAACCCTCAAAGACGGACGAGTGGTTGCAGTAAAACGCCATTATGAAACCAACGCAAAACGTGTGGATCAGTACATGAACGAGGTAGAAATTCTAGCTCGCTTACGACACGACAACCTCGTAGCTCTTTATGGATGCACATCCAGACACAGCCGAGAACTCATCCTCGTTTACGAGTACATCCCCAACGGAACCGTCGCCGACCACCTCCACGGCAAGCGATCTCGCTCATCTTTGCTTCCGTGGCCCATACGCATGAACATCGCCGTAGAAACAGCCGAAGCACTAGCCTACCTTCACAATTCCGACGTCATCCACCGCGACGTCAAGACCAACAACATCCTCCTCGACCACGATTTTCGAGTTAAGGTTGCTGATTTCGGCCTCTCACGTTTGTTCCCTAACCATGTCACACATGTTTCTACTGCTCCACAAGGGACACCTGGTTATGTTGACCCTGAGTATTTCCGGTGCTTCCAACTAACCGATAAGAGCGATGTTTATAGCTTTGGAGTAGTACTGATAGAGCTTGTTTCGTCGTTACAAGCCGTGGATGTTTCGAGGAGTGATCATGACATAAACTTGGCCTTCATGGCGGTGGATAAGATTCAGAACAATGCAGTGAATGAGCTGATTGATCCGTATTTAGGGTTCCAAACCGATAGTGTTGTGAGGGAGATGGTTATAGGAGTTACTGAATTGGCCTTCAGGTGTTTGCAGAAGGAGAGAGACATGAGGCCTTCCATGAAAGAGGTGGTTGAGGTGTTGAGAGAGATTCAGGGTAAGAAGAATAATAATGTGAAGGCTAATAATAATAAAGAAGTGGTTATGATAAAGATGGATCATAAGGTAGAAGAAATGGCGCTTTTGAAAAATGGTAGTACTCCAGTTTCATCAAATTCGATTTCTGATAATTGGGTTAGTTTCTCTACTACTTCTGAGTCTAGTTCCTCACAGAATCTATTATCTCTTTCTGTTGGTAAACCTTGGATTGGGCGGTAA 2106 0.4288 MNIPCDFPHCSIFFFLLQLLVIIITVGADDDNNFRKCSSFFSCGNVNNVGYPFWGDNRASYCGQPDFRLACQDDTPKLIVNNSVTYRILSLSLNNQSLKVVRDDYWKTICPSQYTNTTSFDSTTTMLKLADGFQNMALLYDCLNIFNPMGRFITTATTVCSKQNVYYGSVPFSMDLTGICEVVVIPIESDFVDLVLRSQKGIEDAIEQGFVLRWSVDIEECDKCVMSGGECGYMNHNFTCFCNNGTQGTTCSSGIGVGVGAFCGVLILCLMYLVMKRRKRKVEQLNSDKNLLSPSLSSINGDVTKSSATKTSMAQSAPSYPAASKFSSVQKSFYFGVQVFSYDELEEATKNFDPSMELGDGGFGTVYYGTLKDGRVVAVKRHYETNAKRVDQYMNEVEILARLRHDNLVALYGCTSRHSRELILVYEYIPNGTVADHLHGKRSRSSLLPWPIRMNIAVETAEALAYLHNSDVIHRDVKTNNILLDHDFRVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYFRCFQLTDKSDVYSFGVVLIELVSSLQAVDVSRSDHDINLAFMAVDKIQNNAVNELIDPYLGFQTDSVVREMVIGVTELAFRCLQKERDMRPSMKEVVEVLREIQGKKNNNVKANNNKEVVMIKMDHKVEEMALLKNGSTPVSSNSISDNWVSFSTTSESSSSQNLLSLSVGKPWIGR 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3339 701 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 679 IPR044652 GO:0004672
Acco02g3339 701 Gene3D Transferase(Phosphotransferase) domain 1 429 654 - -
Acco02g3339 701 ProSiteProfiles Protein kinase domain profile. 352 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3339 701 ProSiteProfiles EGF-like domain profile. 217 252 IPR000742 -
Acco02g3339 701 Gene3D Phosphorylase Kinase; domain 1 325 428 - -
Acco02g3339 701 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Acco02g3339 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Acco02g3339 701 SUPERFAMILY Protein kinase-like (PK-like) 330 628 IPR011009 -
Acco02g3339 701 FunFam Wall-associated receptor kinase-like 20 429 637 - -
Acco02g3339 701 SMART serkin_6 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3339 701 CDD STKc_IRAK 358 627 - -
Acco02g3339 701 FunFam receptor-like protein kinase FERONIA 315 428 - -
Acco02g3339 701 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3339 701 Pfam Wall-associated receptor kinase galacturonan-binding 37 102 IPR025287 GO:0030247
Acco02g3339 701 ProSitePatterns EGF-like domain signature 1. 240 251 IPR000742 -
Acco02g3339 701 Pfam Wall-associated receptor kinase C-terminal 174 244 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3339 Acco-ChrAcco02 46313499 46318890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3339 41 687 Receptor kinase-like Gene Family AT1G25390 41.437 2.29e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Acco02g3339 Pkinase 1.6e-48 CL0016