Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3324 ATGCCCAAATCTCAAACCCTAAGTTCCGTTGAACTCTTCCACAGTGCTCTTCAATCCCTAAACTCATCGCCTCCCTCTCCGTCAGTTTTTCTCCAGCCGCATTCCTCACCTCTTCCGCCTTCTTTCCCCCAATCTAAAATCATCCCTAAAACCCGCTTCGTGGTGGATGCATTCCGCCTTGCCGGCGATTACTCTGTTGCCTACTTTCTTTCCCATTTCCACTCCGATCACTATACTGGTCTTGGCTCTAATTGGTCTAAAGGTATTGTCTTTTGCTCCAACACGACTGCTCGACTTGTCGTTGAAGTGCTCGGGGTTCCTTTGAAGTTCGTAGTCCCTTTACGGCTCTGTGAACCGGTTGAGATTGATGGCTGTGAAGTTACTCTTATTGATGCGAATCATTGTCCTGGGGCTGTGCAATTCTTGTTCAAAATTCCAGGTGTTGATGGAAAGTGCGAGAGGTATGTTCACACGGGAGATTTTCGGTTTTCTAAGGCAATGAAGTCAGAACCTCTACTTGCTGCATATGTTGGCGCGGATGCTGTATTTTTGGACACAACCTATTGTCACCCAAAGTTTCAGTTTCCTAGCCAAAAGGAGTCTGTAGCTTATATAGTTGATGTAGTAGGGAGGGTTGAAAGTGAAAATGATTTTTCTACTAGAAATGTTTTGTTTCTTGTTGCTACTTATGTTGTTGGGAAAGAGAAGATTCTGCTAGAACTTGCTCGTAGGTTTAAACGTAAAGTGCATGTGGATGCTAGAAAAATGGAGGTTTTGCGGGTTCTTGGGTATGGGGAAGGCGGTGAGTTTACAAATGATAGCTCTCAAACTAATATTCATGTTGTAGGGTGGAATGTGTTGGGTGAGACATGGCCATACTTTAGGCCTAATTTTGTTAGAATGAAGGAGATTATGACTGAGAGAGGGTACTCCGAAGTTGTGGGTTTTGTTCCAACTGGATGGACTTATGAAGTGAAGCGCAATAAATTTACTGTGAAGTCAAAGGATTCATTTCAGATTCATCTTGTACCATATAGTGAGCATTCTAACTATGATGAGCTCAGGGAATATGTAAAGTTTTTGAAACCTAAGCGTGTTGTTCCTACCGTTGGTGTAGATGTTGACAAAACTGACAGTAAACATGTGGAAAAAATGATGAAGCATTTTGCTGGGTTAGTTGATGAGACAGCCAATAAGCAGGACTTTCTAAAGGGATTTCATTGTACATCTAGCGAAGGGGGCTTCAAGTTTGACAAGGCTGATAATGATTCCACAATGCCAGGGCAGAACATGGAGACAGAAGTGAAGTTATTCGAACAGGGAGATGATAAGAGCATTAGTCTAGATACTGTTCTAAATTTTTCTTCTACTCTTGAGGAACCTGGCTTGCAGGATCCCACATCACTAGAGGATGAGGAAAGAGAGAAAATCTGTCAAGAGATCTCCAGTTATTTGCCTGCATGGGTGACTCAAGGACAAATTCTAGAGCTGATCAGCATTGCAAGGGGCAATGTTGTTGAGGCTGTTTCTAATTTCTATGAACGTGAAACTGAATTTCACAGTCAAGTATTTTCCTGTCAAACCTTTGTTTCTGCATCCACATGCCTATCAAATGACAGTGATTTGCTTTCAAAACCACCCGCTGTTAGTAGTAAAACTTGCATGAGTGTTGACATTTCACCAAGTCAAAACTTCAAGTTATCCGCCCCAAGAAATTCAGTAGCAATTAGCATTTCTGCTACTAAAAGGAAGAGAAATAGTGAAAGAAAGCTTAACAAGAAATTAAAAGTCCATACAAAATCAGAATCAAGTGGGTCAAAACAGTCCATGATAACGAAATTCTTCACTAAAGCCTTGCCTGACATCACCCAATCTGGTAATTTTGAAGCTAGTACTGATGAAAGCCCTAAAGTTGAAGACTTGCCCCAGTTAGATGTTGAAAAAGCATACAAGGATGAGATCAACCAGTTCATGCAGATAATAAATGGCAACGAATCATTAAAAAATTATGCTATCACAATAATTGAGAAGACAAAAGGAGATGTAAATAAGGCATTGGATATATATTACTGTAATCCTGGCAATTTTGATGAGAATGAAAAATCAGTTCAAGTTGAGTGCAAAGTGGACCACTCTTCAGAAAAGAAATGCGTGTCACAGGAATTGAGATCTGCACCAGATATTTCTTTGCAAAGCATATCAAGAGAGAATGCCGATGTAAATCTTGTATCTCTACCACCTAAAGAATACAACCCTAAAGAACATGCATGTTGGAGAGATGGAGAGTCTGCTCCATATTTACATCTTGCGCGAACCTTTAACCTTCTTGAGGATGAGAAAGGGAAGATAAAGGCTACTTCAATGTTATGCAATATGTTCAGAAGTTTGTTGGCCTTGTCTCCTGCTGATGTACTTCCTGCTGTATATCTATGCACAAATAAAATTGCCGCAGACCATGAAAATAAGGAATTAAATATTGGCGGAAGTCTGATTACTGCAGCACTGGAAGAGGCATGTGGAACTACTCGATTGAAAATAAAGGAGATGTATAACAAATTTGGAGACCTTGGTGATGTTGCTCAAGAGTGTCGACAAACACAGAGATTGCTTGCTCCTCCAACACCGCTTCTGATAAAAGATGTTTTCTTCGTACTCCACAAGATAAGGGTTGTTGAACTTATTAATGAAGAAATGGCTTAG 2700 0.4056 MPKSQTLSSVELFHSALQSLNSSPPSPSVFLQPHSSPLPPSFPQSKIIPKTRFVVDAFRLAGDYSVAYFLSHFHSDHYTGLGSNWSKGIVFCSNTTARLVVEVLGVPLKFVVPLRLCEPVEIDGCEVTLIDANHCPGAVQFLFKIPGVDGKCERYVHTGDFRFSKAMKSEPLLAAYVGADAVFLDTTYCHPKFQFPSQKESVAYIVDVVGRVESENDFSTRNVLFLVATYVVGKEKILLELARRFKRKVHVDARKMEVLRVLGYGEGGEFTNDSSQTNIHVVGWNVLGETWPYFRPNFVRMKEIMTERGYSEVVGFVPTGWTYEVKRNKFTVKSKDSFQIHLVPYSEHSNYDELREYVKFLKPKRVVPTVGVDVDKTDSKHVEKMMKHFAGLVDETANKQDFLKGFHCTSSEGGFKFDKADNDSTMPGQNMETEVKLFEQGDDKSISLDTVLNFSSTLEEPGLQDPTSLEDEEREKICQEISSYLPAWVTQGQILELISIARGNVVEAVSNFYERETEFHSQVFSCQTFVSASTCLSNDSDLLSKPPAVSSKTCMSVDISPSQNFKLSAPRNSVAISISATKRKRNSERKLNKKLKVHTKSESSGSKQSMITKFFTKALPDITQSGNFEASTDESPKVEDLPQLDVEKAYKDEINQFMQIINGNESLKNYAITIIEKTKGDVNKALDIYYCNPGNFDENEKSVQVECKVDHSSEKKCVSQELRSAPDISLQSISRENADVNLVSLPPKEYNPKEHACWRDGESAPYLHLARTFNLLEDEKGKIKATSMLCNMFRSLLALSPADVLPAVYLCTNKIAADHENKELNIGGSLITAALEEACGTTRLKIKEMYNKFGDLGDVAQECRQTQRLLAPPTPLLIKDVFFVLHKIRVVELINEEMA 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3324 899 Gene3D - 48 370 IPR036866 -
Acco02g3324 899 FunFam DNA ligase 194 348 - -
Acco02g3324 899 Gene3D - 744 893 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Acco02g3324 899 Gene3D - 194 348 - -
Acco02g3324 899 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 744 889 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Acco02g3324 899 Pfam DNA repair metallo-beta-lactamase 269 373 IPR011084 -
Acco02g3324 899 SUPERFAMILY Metallo-hydrolase/oxidoreductase 66 371 IPR036866 -
Acco02g3324 899 MobiDBLite consensus disorder prediction 583 604 - -
Acco02g3324 899 Pfam DNA ligase N terminus 765 888 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Acco02g3324 899 CDD SNM1A-1C-like_MBL-fold 32 191 - -
Acco02g3324 899 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 41 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3324 Acco-ChrAcco02 45894736 45898695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3324 740 888 Core DNA Replication Machinery Family AT1G08130 39.597 1.70e-30 127