Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3316 ATGGATTTACAAAACATTGGAGCTGGAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCCAGAATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACCAATGTAGTCAATATGGTTGACATTGCAAAGGCTTTGGCTAGGCCAGCTTCTTACACAACCAAGTATTTTGGTTGTGAGCTGGGAGCTCAATCCAAATTTGATGAGAAAACCGGGACTTCTCATGTGAACGGGGCACATGATACTCCAAAACTTGCTGGTCTTCTGGAGAACTTCATTAAGAAATATGTTCAGTGCTACGGTTGTGGAAATCCTGAAACTGAGATCTTGATCACCAAGGGTCAAATGATCCAGCTGAAATGCGCTGCGTGTGGGTTTGTGTCAGATGTGGATATGAGAGACAAGCTGACCACCTTTATACTGAAGAATCCTCCTGAACCCAAGAAGGGGTCCAAAGACAAGAAGGCCATGAGAAGGGCTGAGAAGGAGAGACTGAAAGAAGGTGAAGCAGCTGATGAGGAACAGAAGAAATTGAAAAAGGAAGGTAAGAAAAAAGTCTCTACCTCTTCCAAGGATGGAACTGCAAAATCAAAAAAGAAACCCAATGGCTCTGATGAAGACCGTGCATCACCTCCTCATGGTAAGATCCATGAGGAGCCTCGTGTTGAAGAGGAAGAAGATGATGATGATGTCCAATGGCAAACAGACGCATCACTGGAGGCTGCCCGCCTACGTATCCAGGAACAACTGAGTGCTGCAACAGCTGATATGGTCTTGCTCTCCACAAATGAGCCAGAGAAGAAGGCAAAAGAAGCTAGTAAGGCAAATGATGGGTCTGAGAATGGGAGCTCAATGCCCTACAAGTCTCTTGTTGAGGAAGTCAAATCTAATTTGCGGAAAGGGGTATCTGCAAAGGAACTACAACACCATCTTGCTGCCCTTACTGCATCTTCTAAGGAAAGAATGAGCGCTTTTTTCGAGGCCCTTGTTGCTGGTGTTGAGAAAGGATTTGCCAAGGAACTTGTCAAGAATAAGAACTACCTTGCTGCTGCTGTTGCTGGGGAAGCAGGATCGCAGATGCTGTTGCTGCATGCAATTGAGGACTTCTGTTGTAAGAGCAGTGCCAATGCTTTGAAGGAGGTTGCCTTAGTGCTGAAGGCGCTGTACGATGCCGATTTGCTGGAGGAAGAGCACATAGTGCAATGGTATCAGAAAGGGCTAAAGGGAGATGCCAAGGACTCCAAGATATGGAAGAATGCTCAACCCTTCATTGATTGGCTTCAGAGTGCAGAATCGGAATCAGAGGAAGAGTAA 1320 0.4561 MDLQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETEILITKGQMIQLKCAACGFVSDVDMRDKLTTFILKNPPEPKKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKEGKKKVSTSSKDGTAKSKKKPNGSDEDRASPPHGKIHEEPRVEEEEDDDDVQWQTDASLEAARLRIQEQLSAATADMVLLSTNEPEKKAKEASKANDGSENGSSMPYKSLVEEVKSNLRKGVSAKELQHHLAALTASSKERMSAFFEALVAGVEKGFAKELVKNKNYLAAAVAGEAGSQMLLLHAIEDFCCKSSANALKEVALVLKALYDADLLEEEHIVQWYQKGLKGDAKDSKIWKNAQPFIDWLQSAESESEEE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3316 439 ProSiteProfiles W2 domain profile. 279 439 IPR003307 GO:0005515
Acco02g3316 439 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Acco02g3316 439 MobiDBLite consensus disorder prediction 143 234 - -
Acco02g3316 439 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Acco02g3316 439 MobiDBLite consensus disorder prediction 148 223 - -
Acco02g3316 439 Coils Coil 159 179 - -
Acco02g3316 439 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Acco02g3316 439 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Acco02g3316 439 Pfam eIF4-gamma/eIF5/eIF2-epsilon 361 439 IPR003307 GO:0005515
Acco02g3316 439 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Acco02g3316 439 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Acco02g3316 439 CDD W2_eIF5 288 432 - -
Acco02g3316 439 Gene3D - 3 104 - -
Acco02g3316 439 SMART 542_3 347 435 IPR003307 GO:0005515
Acco02g3316 439 Gene3D - 105 145 - -
Acco02g3316 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 438 IPR045196 GO:0003743|GO:0006413
Acco02g3316 439 MobiDBLite consensus disorder prediction 263 289 - -
Acco02g3316 439 SUPERFAMILY ARM repeat 289 433 IPR016024 -
Acco02g3316 439 Gene3D - 278 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3316 Acco-ChrAcco02 45805433 45806752 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3316 1 432 Eukaryotic Initiation Factors Gene Family AT1G36730 64.853 0.0 510