Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3266 ATGGAGAACTTCGATTCAAAGAGCGGTTTCTGTTCACTTTCTAGAACCTTCCACAGCCTCAGAACCCCCGTTCATCTTCCTCCTCCTCACTCTCCTCTCTCTGCTTCTCAATACGCTATCTCTCTCCATCTCAAATCGCCCTGGTCCGATTCAGTTCCCGCCCTTATCGACTCAGTCTCCGGCCACCGAGTTTCCTTCTCCGAGTTCATCCATTCCTCACAAACCTTAGCCTTTAATCTTCAATCTCTCGCAGGCCTCTCCAAAGGCGACATAGCCTTTGTATTATCCCCCAATCTCATTCAGGTCCCGATCCTCTACTTCGCTCTACTTTCCCTTGGCATCGTCGTCTCTCCGGCGAACCCACTCAGCACACGCGCCGAACTTTCCCACCTCTTCCAGCTATCGTCGCCAGTAATCGCCTTCACGACGGCGTCCGCAGCACATAACCTTCCGCACAATCTGCGACTCCGAGTCATCCTTCTCGACTCCCCTGAGTTCGACTCGCTGATGACAACCAGAAGCGTTGCGAAACCAGTGAGCCCACGCGTTGAGGTGAGACAATCAGACATAGCCGCGATTTTGTACTCTTCGGGAACCACGGGGAAGGTGAAGGGAGTAATGCTGACTCACCGGAATCTGATGGCATCAGCGGCGAGTTATGACGCGGCTCGAACTCAGAGAGAAGTTCCGGCCGTTATCCTCTACACAGTGCCGTACTTTCACGTGTACGGTTTCACGTACTGTCTGAGGTCGGTGGTGTTGTCCGAGACGGTGGTGTTGATGGAGAGATTTAGGGTGGAGAAGATGTTGCGGGCGGTGGATGAGTTCAGAGTGACTCATCTCGCGGTGGCTCCGCCGGTGGTGGTGGCGATGGCAAAAGGAGATGTAACGGACGGTTACGATTTGAGCTCGTTGGAAGGCATCTCTTGTGGGGCGGCTCCGCTAGGAAAGGACGCCTTCGCGGCTTTCAAATCGAAGTTCCCCAAAGTCGTGCTTGTCCAGGGATATGGGTTAACAGAAACAACGGCATCGATCTGTCGAACAATAGGAGAAGAGGAGAGCAATATAAGAGGAACAACGGGGAGGCTCTTAGCTGGGGTTGATGCTAAAATTGTGGACCCACACACTGGATTAGCACTGTCTCCTGGCGAGGAAGGCGAACTTTGGCTTAGAGGTCCTCCTATCATGAAAGGCTATGTAGGGGATGCAGAAGCAAACTCGTCCATTTTCGTTGATGGGTGGTTGAGGACTGGAGACTTGTGCTATTTTGATCACCAAGGCTACCTTTTCGTTGTTGATAGACTGAAAGAATTGATCAAATACAAGGGATATCAGATTGCTCCTGCGGAGCTGGAAAACCTGCTTCAGTCCCATCCACAGATCCAGGACGCTGCAGTTATTCCTTACCCTGATGAAGAAGCAGGGCAGGTGCCTATGGCCTTTGTGGTGAGACAACCCAACAGTTCACTAAGCGAAGCGGACGTACTTGACTTTGTTGCCAAACAGGTTGCACCTTACAAAAAAATAAGGCGCATATTATTTGTGAGCTCCATACCAAAAAATGCAGCAGGAAAAATTTTGAGGAAAGAATTGAGTAAAACTGTCCTCCATCATCAATCTATATCTAAATTGTAA 1635 0.5058 MENFDSKSGFCSLSRTFHSLRTPVHLPPPHSPLSASQYAISLHLKSPWSDSVPALIDSVSGHRVSFSEFIHSSQTLAFNLQSLAGLSKGDIAFVLSPNLIQVPILYFALLSLGIVVSPANPLSTRAELSHLFQLSSPVIAFTTASAAHNLPHNLRLRVILLDSPEFDSLMTTRSVAKPVSPRVEVRQSDIAAILYSSGTTGKVKGVMLTHRNLMASAASYDAARTQREVPAVILYTVPYFHVYGFTYCLRSVVLSETVVLMERFRVEKMLRAVDEFRVTHLAVAPPVVVAMAKGDVTDGYDLSSLEGISCGAAPLGKDAFAAFKSKFPKVVLVQGYGLTETTASICRTIGEEESNIRGTTGRLLAGVDAKIVDPHTGLALSPGEEGELWLRGPPIMKGYVGDAEANSSIFVDGWLRTGDLCYFDHQGYLFVVDRLKELIKYKGYQIAPAELENLLQSHPQIQDAAVIPYPDEEAGQVPMAFVVRQPNSSLSEADVLDFVAKQVAPYKKIRRILFVSSIPKNAAGKILRKELSKTVLHHQSISKL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3266 544 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
Acco02g3266 544 Gene3D - 31 436 IPR042099 -
Acco02g3266 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 533 - -
Acco02g3266 544 Pfam AMP-binding enzyme 53 441 IPR000873 -
Acco02g3266 544 FunFam 4-coumarate--CoA ligase 2 437 538 - -
Acco02g3266 544 SUPERFAMILY Acetyl-CoA synthetase-like 54 536 - -
Acco02g3266 544 CDD 4CL 23 531 - -
Acco02g3266 544 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Acco02g3266 544 Gene3D - 437 538 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3266 Acco-ChrAcco02 44934189 44947561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3266 4 544 Monolignol Biosynthesis Gene Families AT5G63380 49.819 0.0 547