Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3247 ATGGACATTGGCGAACCATCATGCATCATAGTAGCCGAGCTGCCTACCCTCCGAGAACTCTTCCGGCTCGAAGATGAAGCACAGAGGGAAGCCACCAGCGATGATAGTATCACGACGGAGTACCACACGCCTGATGGGACTGGTTCTGGTATCGAGCCTTCTCGCTTATCGTCTTTTGTGCTCACATTCAATAATCTCACCTACAGTGTGAAGGTCCGCCAGAAAATGAACTTCTCAACGTTGTTCTCAGCGAAAAAACGTTTTGGAGAACCAGAAACCAAGATTCTTCTGAATTATATCTCCGGCGAGGCTCGTGACGGCGAGATTCTTGCTGTTATGGGAGCTAGTGGTTCGGGGAAATCCACTCTGATTGACGCCTTGGCCAATCGAATAGCTAAAGGAAGCTTGAAAGGGAGCGTTAAATTGAACGGTGAGGCCTTAGAATCGCGGCTTCTGAAAGCAATTTCAGCCTATGTAATGCAAGACGACCTTCTCTTTCCGATGCTCACGGTGGAAGAAACTCTAATGTTCGCAGCTGAATTCCGATTATCACACAGACTCTCTAGATCCAAGAAGAAGATGCGAGTACAAGCTCTGATCGACCAGCTCGACCTCAGAAACGCCGCCAAAACCGTCATCGGCAATGAAGGCCGCCGTGGTGTATCCGGCGGCGAACGACGCCGTGTGTCCATCGGCATTGATATAATCCACGATCCGATCATATTGTTCCTCGATGAACCTACATCGGGACTGGATTCCACGAGCGCATTCACGGTGGTAAAGGTTTTGCAGACGATCGCACACACCGGAAGCATAGTTGTGATGGCCATCCACCAACCGAGTTCGCGAATTCTTGGCCTTATCGACAGAATGATATTCTTATCTAGAGGAGAAATAGTGTTCAGTGGTTCGCCTTTGCAGCTTCCCCTGTTCTTCGCTGAATTTGAACACCCAATTCCAGAAGATGAGAACCAAACCGAGTTTGCATTGGACTTGATTCACGAGCTAGAAGGGTCATCTAGTGGAACTCATAGATTGGTGGAGTTTAACAAGTCGTGGCAGATAAAGAAACAACCAGGAAGTAATGATAGCACAGAAGTTGAATATCTCCACCATGGATTATCTTTGAAAGAAGCGATCAGTACAAGCATCTCGAGGGGAAAACTAGTTTCAGGAATCATAAAATCTACTGATAATAACGCAGCTAGATCATCATCAACTTCTTCAAAGGTACCAACATTTGCAAACCCATTATTGATCGAAGTGATAAAGCTGTCAATAAGATCATACATCAATTCAAGAAGAACCCCTGCAATATTCAGGACACGATTGGCCATAGTACTCATCACAGGCTCACTTCTAGCTTCAGTGTTTTGGCGTTTAGATGATTCTCCAAAAGGGGTCCAAGAAAGGCTTAGCTTCTTCGCTTTCGCCATGTCCTCCACCTTCTACACAACAGCAGAGGCGCTTCCCATGTTCCTTCAAGATCGATACATTTTCATGAGAGAAACTGCTTACAACACTTACCGTAGATCCTCCTATGTCTTTTCTCAAGCTCTTGTATCTTTACCTTCGTTACTTGTTCTCTCATTGGCTTTCGCCGCGACGACGTTTTGGGCAGTGGGACTTGATGGAGGATGGTTCGGTTTCTTGTTCTATTTCGTCTTCATATTTGCTTCTTTCTGGGCAGGTAACTCATTCGTCACCTTCCTCTCTGGCGTACTACCTCACGAGATGCTAGGTTATACCATAGTGGTGAAAGCCTTAGCATATTTCTTGCTGTTCAGTGGATTCTTCATTAACAGAGACAGAATCCCTGTTTATTGGATTTGGTTTCACTACTTGTCTTTGGTGAAATACCCATATGAAGCTGTGTTGCAGAACGAGTTTGATGACCCAGTGAGTTGCTTTGTGAAAGGTGTGCAGGTTTTCGATAACACGCCTCTGGGCGAGTTGCCGAGTTCCATGAAACTGAAGCTATTACAGAGCTTGAGTGGCACGTTAGGGACGAACATAACGAACTCAACTTGCTTGACGAGAGGTACTGATATATTGCAGCAGAATGGGATAACACAGTTGAGCAAGTGGAACTGTTTGTGGGTAACAGTGGCTTGGGGATTTTTGTTTAGGGCTCTGTTTTACTTCTCCTTGTTGCTAGGGAGCAAGAATAAGAGGAGAGAAATTCCAAAGGAAAGCAATAATGTTTTCATGAAGGATTGTAGAGGAGTTGAAGGTGATCTGCTAAATGTTGATCATTTGCTTGTTGACACCGGAGCTAGATAA 2283 0.4538 MDIGEPSCIIVAELPTLRELFRLEDEAQREATSDDSITTEYHTPDGTGSGIEPSRLSSFVLTFNNLTYSVKVRQKMNFSTLFSAKKRFGEPETKILLNYISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGSVKLNGEALESRLLKAISAYVMQDDLLFPMLTVEETLMFAAEFRLSHRLSRSKKKMRVQALIDQLDLRNAAKTVIGNEGRRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFTVVKVLQTIAHTGSIVVMAIHQPSSRILGLIDRMIFLSRGEIVFSGSPLQLPLFFAEFEHPIPEDENQTEFALDLIHELEGSSSGTHRLVEFNKSWQIKKQPGSNDSTEVEYLHHGLSLKEAISTSISRGKLVSGIIKSTDNNAARSSSTSSKVPTFANPLLIEVIKLSIRSYINSRRTPAIFRTRLAIVLITGSLLASVFWRLDDSPKGVQERLSFFAFAMSSTFYTTAEALPMFLQDRYIFMRETAYNTYRRSSYVFSQALVSLPSLLVLSLAFAATTFWAVGLDGGWFGFLFYFVFIFASFWAGNSFVTFLSGVLPHEMLGYTIVVKALAYFLLFSGFFINRDRIPVYWIWFHYLSLVKYPYEAVLQNEFDDPVSCFVKGVQVFDNTPLGELPSSMKLKLLQSLSGTLGTNITNSTCLTRGTDILQQNGITQLSKWNCLWVTVAWGFLFRALFYFSLLLGSKNKRREIPKESNNVFMKDCRGVEGDLLNVDHLLVDTGAR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3247 760 CDD ABCG_EPDR 60 303 - -
Acco02g3247 760 Pfam ABC-2 type transporter 425 630 IPR013525 GO:0016020|GO:0140359
Acco02g3247 760 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 713 - -
Acco02g3247 760 Pfam ABC transporter 98 249 IPR003439 GO:0005524
Acco02g3247 760 MobiDBLite consensus disorder prediction 27 50 - -
Acco02g3247 760 SMART AAA_5 106 298 IPR003593 GO:0016887
Acco02g3247 760 Gene3D - 81 310 IPR027417 -
Acco02g3247 760 FunFam ABC transporter G family member 6 86 312 - -
Acco02g3247 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 308 IPR027417 -
Acco02g3247 760 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 321 IPR003439 GO:0005524
Acco02g3247 760 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3247 Acco-ChrAcco02 44682855 44687218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3247 91 298 Calmodulin-binding Proteins AT2G36910 28.000 4.95e-11 64.7