Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3239 ATGGAAATTGATAGTTCTACCGATGCTTCTTCGTCTTCGCCAAAGAATATATACAAAGATCCAGATGACGGCCGGCAGCGATTTTTGCTTGAGCTGGAATTTGTTCAGTGCCTTGCTAATCCCACCTACATTCACTATTTGGCACAGAATCGATATTTAGAGGATGAAGCATTCATTGGATACTTGAAGTACCTCCAATACTGGCAACGTCCTGAATACATCAAATTTATTATGTATCCTCATTGCCTTTTCTTTCTTGAACTCCTTCAGAATGCAAATTTTCGAAATGCAATGGCGCATCCTGGCAATAAGGAACTTGCGCATAGACAACAATTTTACTACTGGAAGAACTATAGGAACAATAGATTGAAACACATTTTACCACGGTCACTCCCTGAATCTAGCGTCACAACTGCACCTCCTGTGGCTGCCTCAACTCCATCTCAGCCTCCGGTGCCTGCTCTGCCATCAGTACCAGCTGCAAATGTTCCGGTGACAGTATCATCTGCTCAGGCTCTTTCTCCGATGCCATATGGTATGCCGCCTGGATCTGCCCTTGCGAAAAATGATATGAGGAATCCTGCACTTGATAGGAGGAAGAGAAAGTAA 609 0.4384 MEIDSSTDASSSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYYWKNYRNNRLKHILPRSLPESSVTTAPPVAASTPSQPPVPALPSVPAANVPVTVSSAQALSPMPYGMPPGSALAKNDMRNPALDRRKRK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3239 202 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 13 115 IPR038089 -
Acco02g3239 202 MobiDBLite consensus disorder prediction 132 151 - -
Acco02g3239 202 Pfam SOH1 26 118 IPR008831 GO:0003712|GO:0006355|GO:0016592
Acco02g3239 202 MobiDBLite consensus disorder prediction 1 20 - -
Acco02g3239 202 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 10 202 IPR008831 GO:0003712|GO:0006355|GO:0016592
Acco02g3239 202 MobiDBLite consensus disorder prediction 1 17 - -
Acco02g3239 202 MobiDBLite consensus disorder prediction 174 202 - -
Acco02g3239 202 FunFam Mediator of RNA polymerase II transcription subunit 31 14 115 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Acco02g3239 Med31 2.2e-35 No_clan