Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3203 ATGGCTTCTCCAAATTCTTCCCCTTCTGCTTTTCCACCCACTTCTGTTGGTAATCCCCCATCAAATTCTCTCATATCATCACAGCCTCCCACTTCTCTCCCCAGTCAAACCTCTAATACTCCTGCTCCTTCATCTCCATCTGACACTGCAACCCCACCTCCTTCTCCATCTCTTTCTCCTCCACAGGCTACACCACCGCCAACTTCATCCCCACCCCCGGCATTGCCGCCACCAGCTTTGCCCCCGCCTGAATCATCATTGCCGCCACCAGCTTCACCCCCGCCTAAACTATTGTCACCACCAGCTTCAACCCTGCCTCCAGCATTGCCACCGCCAGCTTCAACCCCACCTCCAGCATTGCCACCGCCAGCTTCAACCCCGCCTGCAGCATTGCCACCACCAGCTTCAACCCCGCCTCCAGCATTGCCACCACCATCTTTACCATCTACACTAAATTCTCCTCCACCAACTCCTTCAGCATTGTCACCACCATCACCTCCACCAGCATCTGCTTCCACCCCTCCTCCAGCTGAGAAGTCAACTCCTGCTCAAAATCTATCCCCACCACCTCCAGTAGTAGGTTCTCCTCCTCCTCAGGCCTCAAAGGAACCTCCTGCAGCAGATCCACCTCCCTCTCGACACAATTCACCTCATCCTTCTCCTCCAAAGAATTTCCCAAAATCACCACCATCCAATTCCCCTCCTCCACCTCTGGGAAAGCCGCCAGAAAGTACTCCGGTGCTTACACCCCCACCATCTATTTCTGAATCTCCTCCTGCAGATGATCCCCCTCAATCTGCAAGACCATCACCTTCTCCTCCTTCAGTTCCATCTTCCTCTTCATCTCCACCAACTGTTTCACCTTCGCCACCAACTACTACTAATTCATCAGCAGCTGGGGGCCCAATTGCAGCCCTACCGTCTATTCCAACAGAGAAACCAACTGCAAAATCAACTGGTGATACTAGTGCTAATGCAAATGCCCCGCCTACGCATACAAAGGGTTTAAATACAGGAGGAGGTGCGGCTATTGGTGTCATTATTGGTTTTCTTGTCCTTAGCCTTCTTATTATGGCTGTGTGGTTTGTAAAACGAAAGAGGAAGCAAGCAGGATCAAAAGTTGGTTATGCTATGACCTCTCCATTTGGCTCATCTCAGAATTCTGGTACCATATTCTTGAGGCCACAGTCTCCAGCTCCCTATTATGGTAGTAACTCTGGTAGTGGTATCATGTATTCTTCATCAGAGCCTGGTGGAAGAAGTCAGTCAAGATCATCATTCATGTATGAAGAACTTGTGGACGCAACAAATGGGTTTTCCGCACAGAACCTTTTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGCTTGCTCACTGATGGAAGAGAAGTTGCTGTGAAACAGCTCAAAGTTGGTGGCGGACAAGGGGAACGTGAATTTCAAGCAGAAGTGGAGATTATTAGCCGAGTACATCACCGCCATCTGGTTTCCTTGGTGGGTTACTGCATATCAGAGCATCAAAGATTGCTTGTCTATGACTATTTGCCCAACAATACCCTTCATTACCATCTTCACGGTGAAGGCAGGCCAGTTTTGGACTGGGCTAGCAGAGTCAAGATTGCTGCTGGTTCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATCAAGTCATCAAACATCCTCCTTAACAACAACTTTGAAGCTCAAGTTTCAGATTTTGGGCTTGCAAAACTAGCCTTGGATACATACACACATGTAACTACTCGCGTTATGGGAACCTTTGGGTATATGGCACCAGAGTATGCAACAAGTGGGAAGTTGACTGAGAAATCTGATGTTTATTCTTTTGGAGTTGTGCTTCTGGAGCTAATCACGGGTCGGAAGCCTGTAGATGCCTCTCAGCCAATGGGTGATGAGAGCCTAGTTGAATGGGCTCGGCCTTTGCTAACTGAAGCACTTGACAACGAAGACTTGGAAATATTGGCGGATCCAATATTAGAGAAGAACTATAATAGAAATGAAATGTTCCGGATGATAGAGGCAGCTGCAGCCTGTGTACGTCACTCTGCAGCGAAAAGGCCCCGAATGAGTCAGGTTGTGAGAGCTTTTGATTTGTTGGATGAACAAGCAGATCTGAACAATGGAATGAAGCCTGGGCAGAGCTCAGTGTTTGATTCTGCAGAGCAAAATGAACAAATCAGAATGTTCAGGAGGCTGGCTTTTGGAAGCCAGGATTACAGTAGCAGCTATTTGAACGAGTCTCATAGTAGCTGGAGAAGTAGAGATCAAGAAAACCACACCACCACTCCCTTCTCCCAAAATAGGTCTGGACCATGGAACGTGTAA 2373 0.4842 MASPNSSPSAFPPTSVGNPPSNSLISSQPPTSLPSQTSNTPAPSSPSDTATPPPSPSLSPPQATPPPTSSPPPALPPPALPPPESSLPPPASPPPKLLSPPASTLPPALPPPASTPPPALPPPASTPPAALPPPASTPPPALPPPSLPSTLNSPPPTPSALSPPSPPPASASTPPPAEKSTPAQNLSPPPPVVGSPPPQASKEPPAADPPPSRHNSPHPSPPKNFPKSPPSNSPPPPLGKPPESTPVLTPPPSISESPPADDPPQSARPSPSPPSVPSSSSSPPTVSPSPPTTTNSSAAGGPIAALPSIPTEKPTAKSTGDTSANANAPPTHTKGLNTGGGAAIGVIIGFLVLSLLIMAVWFVKRKRKQAGSKVGYAMTSPFGSSQNSGTIFLRPQSPAPYYGSNSGSGIMYSSSEPGGRSQSRSSFMYEELVDATNGFSAQNLLGEGGFGCVYKGLLTDGREVAVKQLKVGGGQGEREFQAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYLPNNTLHYHLHGEGRPVLDWASRVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLNNNFEAQVSDFGLAKLALDTYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPMGDESLVEWARPLLTEALDNEDLEILADPILEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVVRAFDLLDEQADLNNGMKPGQSSVFDSAEQNEQIRMFRRLAFGSQDYSSSYLNESHSSWRSRDQENHTTTPFSQNRSGPWNV 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3203 790 CDD STKc_IRAK 445 715 - -
Acco02g3203 790 ProSiteProfiles Protein kinase domain profile. 439 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3203 790 Gene3D Transferase(Phosphotransferase) domain 1 515 736 - -
Acco02g3203 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 559 571 IPR008271 GO:0004672|GO:0006468
Acco02g3203 790 PRINTS Proline rich extensin signature 72 97 - -
Acco02g3203 790 PRINTS Proline rich extensin signature 53 70 - -
Acco02g3203 790 PRINTS Proline rich extensin signature 8 29 - -
Acco02g3203 790 PRINTS Proline rich extensin signature 30 46 - -
Acco02g3203 790 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 351 756 IPR047117 -
Acco02g3203 790 MobiDBLite consensus disorder prediction 312 334 - -
Acco02g3203 790 MobiDBLite consensus disorder prediction 766 790 - -
Acco02g3203 790 MobiDBLite consensus disorder prediction 1 337 - -
Acco02g3203 790 SMART serkin_6 439 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g3203 790 Pfam Protein tyrosine and serine/threonine kinase 442 710 IPR001245 GO:0004672|GO:0006468
Acco02g3203 790 FunFam Proline-rich receptor-like protein kinase PERK8 411 514 - -
Acco02g3203 790 SUPERFAMILY Protein kinase-like (PK-like) 418 711 IPR011009 -
Acco02g3203 790 Gene3D Phosphorylase Kinase; domain 1 412 514 - -
Acco02g3203 790 FunFam proline-rich receptor-like protein kinase PERK8 515 727 - -
Acco02g3203 790 ProSitePatterns Protein kinases ATP-binding region signature. 445 467 IPR017441 GO:0005524
Acco02g3203 790 MobiDBLite consensus disorder prediction 46 290 - -
Acco02g3203 790 MobiDBLite consensus disorder prediction 772 790 - -
Acco02g3203 790 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3203 Acco-ChrAcco02 43879553 43885891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3203 255 772 Trihelix Transcription Factor Family AT5G38560 63.705 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco02g3203 PK_Tyr_Ser-Thr 2.2e-46 CL0016