Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3155 ATGATGGTGGCCAGCAAAATAATTCAGGTGGCCGTTGTGGCGGTCCTCTTCACCGCCACGGTGGTGTTATGTAACGACAACGTGCAGATCCCAGCAGACAGAGGCCAATTGAACCAATGGTTCTCGCAGAACGTGAAGCCATTATCAGTCCGGAAGACAACTCTGGACCCTGCCTTGTTGGCCGCCGAAGCCTCTCCGAGGATTATTACGGTCTCGAAGGTCGGAAAAGCCAACTTCAGGACGATAACCGACGCCATTAAAAGCGTGCCGTTGAATAACAAGCGACGAGTGATAATCAAAATCGCTGGCGGAGAATACAGAGAGAAGGTCACCATTGAGATGACCAAGGATTTCATCACTCTTCTTGGTGATCCCACAAACAAGCCCAAGCTGATTTATAATGGAACCGCCAAACAATACGGCACCGTCGATAGTGCTACGTTCATCACCAACAGCAATTACTTCGTCGCTTCAAATATCATTTTCTCGAATTCAGCACCAATGCCGGACGGGCGAATGGACGGAGCTCAGGCGGTGGCGGTCCGAGTGTCCGGCGACAAGTCGGCATTCTACAACTGCGTGTTTTTAGGGTTTCAGGACACACTATGCGACGATAAGGGGAACCATTTGTTCAAGAACTGCATAATCCAAGGCACGGTGGACTTCATATTCGGGAGTGGCAAGTCGTTGTATTTGAACACGAAGCTTGTGGTGGTGGGGAATGTCCCAGGCGTGATCGTGGCTCAGGCGAGAGAGGCCAACGATGACACCATAGGGTACTCCTTCGTTCACTGCGACGTAAGTGGCACGGCCAGTGGCTCCTTCTTGGGAAGAGCTTGGATGTCTCATGGCAGAGTTGTGTATTCTTATAGTTCCATGAGTAATGTTATTACTCCTCAAGGCTGGAACATTAACAACCATCCTGATATGAGTCGGAGTGTATATTTTGGAGAGTACCGGAATAGTGGAAGTGGTGCAAATCCCAAAGGACGTGCCTCATTCACAAAGTTACTAAGTGCCAATGATGCTAAGCAATATCTCACTCTTGGCTTCATTCAAGCTTCTAAGTGGCTGCTTCCTCCTCCTCAATATGCATAA 1098 0.4918 MMVASKIIQVAVVAVLFTATVVLCNDNVQIPADRGQLNQWFSQNVKPLSVRKTTLDPALLAAEASPRIITVSKVGKANFRTITDAIKSVPLNNKRRVIIKIAGGEYREKVTIEMTKDFITLLGDPTNKPKLIYNGTAKQYGTVDSATFITNSNYFVASNIIFSNSAPMPDGRMDGAQAVAVRVSGDKSAFYNCVFLGFQDTLCDDKGNHLFKNCIIQGTVDFIFGSGKSLYLNTKLVVVGNVPGVIVAQAREANDDTIGYSFVHCDVSGTASGSFLGRAWMSHGRVVYSYSSMSNVITPQGWNINNHPDMSRSVYFGEYRNSGSGANPKGRASFTKLLSANDAKQYLTLGFIQASKWLLPPPQYA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3155 365 Gene3D - 64 361 IPR012334 -
Acco02g3155 365 SUPERFAMILY Pectin lyase-like 63 358 IPR011050 -
Acco02g3155 365 Pfam Pectinesterase 69 354 IPR000070 GO:0030599|GO:0042545
Acco02g3155 365 ProSitePatterns Pectinesterase signature 2. 216 225 IPR033131 -
Acco02g3155 365 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 61 358 - -
Acco02g3155 365 FunFam Pectinesterase 64 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3155 Acco-ChrAcco02 43037732 43040909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3155 15 362 Carbohydrate Esterase AT1G69940 54.310 1.06e-141 404