Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3147 ATGCATTCCCCTGCTAAAAAGCTACATTATCGAACTTTGACAACGCCCTCCGTTGACTCGGCAGACACAGTAGAGATGGAGCAGGAACACGAAGAGCATGAAGTGTACGGAGGCGATATCCCCGACGACGCAGAGATGGATACAGATTTCAGAGTTGAAGAAGACGAAGACCAAGAAGGACACCCACATGACCCCAATCACTCTAATAAGGACTTGGAGGACATGAAGAAGAGGCTCAAGGAAATTGAGGAAGAAGCTAGTGCCCTTCGCGAAATGCAGGCTAAGGTTGAGAAAGAGATGGGTGCTGTTCAAGATTCAAGTGGTTCTTCTGCAAGTCAAGCTGAGAAGGAGGAAGTGGATTCCCGGTCAATCTATGTTGGTAATGTTGACTATGGATGTACACCTGAAGAAGTCCAGCAACATTTTCAGTCTTGTGGAACTGTGAACAGAGTGACGATATTGACAGACAAATTTGGTCAACCAAAAGGATTTGCTTATGTTGAGTTTGTTGAGGTTGATGCTGTTCAGAATGCTCTCTTGTTAAATGAATCAGAGTTGCATGGTCGTCAATTGAAGGTCTCTGCTAAGCGTACAAACGTTCCTGGAATGAGACAGTATCGTGGAAGAAGACCTGTGGGTTTTCGACCTAGAATGCCTTACATGCCTGCCCCATTCTATCCTCCATATGGTGGTTATGGGAAGTTTCCAAGGTACAGGCGTCCTACGCGTTACAGGCCATACTAG 744 0.4597 MHSPAKKLHYRTLTTPSVDSADTVEMEQEHEEHEVYGGDIPDDAEMDTDFRVEEDEDQEGHPHDPNHSNKDLEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGSSASQAEKEEVDSRSIYVGNVDYGCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMRQYRGRRPVGFRPRMPYMPAPFYPPYGGYGKFPRYRRPTRYRPY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3147 247 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 37 220 - -
Acco02g3147 247 MobiDBLite consensus disorder prediction 98 121 - -
Acco02g3147 247 Gene3D - 56 195 IPR012677 -
Acco02g3147 247 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 124 192 IPR000504 GO:0003723
Acco02g3147 247 Coils Coil 69 99 - -
Acco02g3147 247 SUPERFAMILY RNA-binding domain, RBD 112 220 IPR035979 GO:0003676
Acco02g3147 247 SMART rrm1_1 123 194 IPR000504 GO:0003723
Acco02g3147 247 CDD RRM_II_PABPs 123 194 - -
Acco02g3147 247 MobiDBLite consensus disorder prediction 23 40 - -
Acco02g3147 247 MobiDBLite consensus disorder prediction 1 83 - -
Acco02g3147 247 MobiDBLite consensus disorder prediction 55 83 - -
Acco02g3147 247 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 122 198 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3147 Acco-ChrAcco02 42956630 42965810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3147 123 194 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 5.17e-09 54.3