Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3131 ATGTTGGATCTCAATGTCGAAATGGAAGGTTATCAGCCCCAAATTGAAGAAGACTCTGGGACTTCGAACTCCTCTGTGCTGAATTTCGAAGAATCTCGAGATGACGATTCTTTTGCCTTCGCATTCGACATACTGAAGAAAGAAACAGATTGTCGAATTGAGGATGAAGATAAGGAGACACCGGAAATCACGACACAGCCACTTTTCCCGCCGAATAATAGTGACGACAAGGGACGCAGAGACTGTGATTTCCGATTGGGATTATCATGTCCGAGAAGTAATCAATGGCTGAATCTGTCCTTCGCTGAGAGTGGTGTTGCTAACACGCAAGGTGAATTGAGAGAGTTTCCGCAAAAGCAACCCCAAACTAGGAAAACCAGAAGAGGGCCCAGGTCTCGAAGCTCACAGTACAGAGGTGTTACTTTCTATCGCAGGACTGGTCGCTGGGAGTCACATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGATACTGCACAGACTGCAGCAAGAGCATATGATAGGGCTGCAATTAAGTTCAGAGGTGCTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAGGTTTGAATAAAGAGGAGTTTGTCCAAGTCCTTCGCCGCCAATGCTCTGGTATCGCAAGAGGGAGCTCAAAATATAGAGGGCTGTCTCTCAACAAATGGGGTCAGTGGGAAGCACAAACCAGCCCTTTCCTTGGCAAAAAGTTTTATGACAAGCTACCCATCAAGAGTGATGGAAGAGGATTGGTGACTAGCTTTGAGCCTAGGAAGGGAGACAGGGCTATTGAGTCAAGCAGAGGAGGTAATGATCAAAATCTTGATTTGAGCCTTGGAATTTCTCCACCTTGTAATGAATCCAAGAATGATGCTGCAAGAGGCTTTTCTTTCCGTTACTCGGCTTGTGAGCCACCCAACAAAGAAGGGCCAATTGCAGATAGCACCGGGGCTGCATTAATAAGGGGACAAGCCATTTATGGAGTGGCAGTGCCATCCAAGTATGACCAAATAAGCTCTGGCTTATATCCTGGTTATGTACAGGACTTTGAGGAGAAGGCCATAGAGAAGAGAAGAGTCGTTCCCTTATCAAGACTCCCAAATCTGGCCTGGAAACTTCATAGCAACGGCAGCATCGCGCCAGTGCCGGTGTTTTCTAATTCTAATGCAGCATCATCAAAATTCATTTCTTCTAGCAACAACAACAATGGTGGATCATCAGCCCCACACCATCCAATAATCAACCCTCATCATCATCATCAGAACAATTCCATCTACAATTTGTGCTTCAGTTCAACCCCAACTTCCACACTTAATAACTCCCCAAGTTGCCAAAGTCTTAGCAGCTGA 1392 0.4533 MLDLNVEMEGYQPQIEEDSGTSNSSVLNFEESRDDDSFAFAFDILKKETDCRIEDEDKETPEITTQPLFPPNNSDDKGRRDCDFRLGLSCPRSNQWLNLSFAESGVANTQGELREFPQKQPQTRKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQTAARAYDRAAIKFRGADADINFSLSDYEEDMKMMKGLNKEEFVQVLRRQCSGIARGSSKYRGLSLNKWGQWEAQTSPFLGKKFYDKLPIKSDGRGLVTSFEPRKGDRAIESSRGGNDQNLDLSLGISPPCNESKNDAARGFSFRYSACEPPNKEGPIADSTGAALIRGQAIYGVAVPSKYDQISSGLYPGYVQDFEEKAIEKRRVVPLSRLPNLAWKLHSNGSIAPVPVFSNSNAASSKFISSSNNNNGGSSAPHHPIINPHHHHQNNSIYNLCFSSTPTSTLNNSPSCQSLSS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3131 463 MobiDBLite consensus disorder prediction 54 77 - -
Acco02g3131 463 MobiDBLite consensus disorder prediction 1 26 - -
Acco02g3131 463 SUPERFAMILY DNA-binding domain 135 193 IPR016177 GO:0003677
Acco02g3131 463 CDD AP2 135 191 IPR001471 GO:0003700|GO:0006355
Acco02g3131 463 FunFam AP2-like ethylene-responsive transcription factor 135 194 - -
Acco02g3131 463 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 108 297 - -
Acco02g3131 463 MobiDBLite consensus disorder prediction 110 137 - -
Acco02g3131 463 ProSiteProfiles AP2/ERF domain profile. 136 192 IPR001471 GO:0003700|GO:0006355
Acco02g3131 463 MobiDBLite consensus disorder prediction 410 431 - -
Acco02g3131 463 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Acco02g3131 463 SMART rav1_2 136 198 IPR001471 GO:0003700|GO:0006355
Acco02g3131 463 Gene3D AP2/ERF domain 135 194 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3131 Acco-ChrAcco02 42687156 42690508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3131 17 251 AP2-EREBP Transcription Factor Family AT2G28550 55.833 8.12e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g3131 AP2 2.1e-10 CL0081