Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3106 ATGGAGAATGAAATATTTCCTTTCCTTGCAAAGGATATTGCTAGATATCAGGTTTCGCCCTTAATGGGTAGCCCCAACAAGCCTATCAAAGAAGAAGATGACGAAGAAGTGCAAATACTGAAAGCTCCACAACAAGAGAAGGGCCTTCCAATTATCAAACCAACAATCTCTGAGTTCAGTGGGGTGCACACTGATGAAAACTTGGCTCGTGTAATTGCTCGCTATGCGGACACTCTAGCTCAACTACAAGTTCGTTGCTTGGGGTATCCAGCTAATCATGATTTGAACTACGAGGCATTAATGCAATTGATGTGTTTTCGATTAAACAATGCTGGTGATCCGTTTATAGGGGGCAGTAGCTACATGCTTACTTCGTATCAGTTTGAGCTGTGTGTATTAGAATGGTTTGCCGAACTTTGGGAAATTGAGAAGAATAAGTACTGGGGATATGTTACTAATGGTGGAACTGAAGCAAATCTTTATGCCATCTTAGTGGGGAGGCAGCTATATCCAGATGGAATTTTGTACACATCAAAAGAATCTCATTATTCATTGTTCAAGGTAGCAAGAGTAGCTAGAGTCAAGTGTGTGGTCGTTGGGGCTAAACCTTCTGGTGAGATTGATTATGATGAGTTGAAGGCATCACTTCTTGCTCACAAGGACAAGCCAGCCATCATCAATCTGAACCTGGGAACAACTATGAAAGGAGGTATTGATGACCCTGATCTAGTACTACAAGTACTTGAGAACTGTGGCTTCACAGAAGATCGGTTCTACATTCACTGTGATGCTGCTTTATTTGGAATGATTCTCCCATTTATTAACGGGGCACCAAAGATTTCTTTCAAGAAGCCTATTGGAAGTGTATCTGTGTCAGGCCATAAATTTCTTGGATGCCCAATCCCATGTGGTGTTCTAATAACTCGTTTAAATTACGTTGACGTTCTTTCTAAAGATACTGATCATGAATACATTGGTTCGAGAGACACCACCATCTCAGGAAGCCGAGGAGGCCATACTTCAATCTTCCTCTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTCAACAAGATGTTAATGAGTGCATTGAAAAAGCAATCTATCTTCATAATCGCTTGAGAGACCATGGAATTGGAGTTATGCGCAACAAGTTTAGCAATATCGTAGTGTTCGAGAGGCCTCTCGATAATGCATTTACTCGTAGGTGGATGTTAGCTAACAAAGGGAATATATCACACGTGGTGGTGCTACAGCACGTGACCATGGAAATGTTAGATTCATTTGTGAGAGAGTTTGTGGAGAATCGATCCATTTACCAAGACAATAATGGAGGAAAAAAGGCTCACTGTATTGCTGAGGATATTGGTGCCAAGAACTGTGCTTGTTCTTTCCACAAGAAGCTGATCTCGTGA 1416 0.4167 MENEIFPFLAKDIARYQVSPLMGSPNKPIKEEDDEEVQILKAPQQEKGLPIIKPTISEFSGVHTDENLARVIARYADTLAQLQVRCLGYPANHDLNYEALMQLMCFRLNNAGDPFIGGSSYMLTSYQFELCVLEWFAELWEIEKNKYWGYVTNGGTEANLYAILVGRQLYPDGILYTSKESHYSLFKVARVARVKCVVVGAKPSGEIDYDELKASLLAHKDKPAIINLNLGTTMKGGIDDPDLVLQVLENCGFTEDRFYIHCDAALFGMILPFINGAPKISFKKPIGSVSVSGHKFLGCPIPCGVLITRLNYVDVLSKDTDHEYIGSRDTTISGSRGGHTSIFLWYALNKRGFNGLQQDVNECIEKAIYLHNRLRDHGIGVMRNKFSNIVVFERPLDNAFTRRWMLANKGNISHVVVLQHVTMEMLDSFVREFVENRSIYQDNNGGKKAHCIAEDIGAKNCACSFHKKLIS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3106 471 Gene3D - 106 348 IPR015421 GO:0003824
Acco02g3106 471 PANTHER - 38 467 - -
Acco02g3106 471 Pfam Pyridoxal-dependent decarboxylase conserved domain 127 377 IPR002129 GO:0016830|GO:0019752|GO:0030170
Acco02g3106 471 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 288 309 IPR021115 GO:0016831
Acco02g3106 471 SUPERFAMILY PLP-dependent transferases 46 435 IPR015424 -
Acco02g3106 471 Gene3D Aspartate Aminotransferase, domain 1 349 437 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3106 Acco-ChrAcco02 42015773 42019051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3106 230 370 Calmodulin-binding Proteins AT1G65960 29.870 2.95e-08 53.5