Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3071 ATGCGCCTAGTCGTAGACCAAGCAAGTCTCAGTTGCTTCTTTGACCACACCACTACTCCCAAGTCCAATATCCTTTGTCGCCCTAAATTTGATAGCGTCGCGAAATTTCATTTGGACTACGTTCACACTCTCTCTGGTTCTCTCACCTCTACGATTTTTCTATCGGATCATGTAGTTTTCGTTCGCTGCTTCTTGATTCGAATTTTGGATCATAGGAGTGGTTTTTGTTCTGTGGGAATCTTGAATTTCGTTTTTTGTATTCCTGGTATCGAATCGAAGATGACAATCCAATCGAAAATGGCGGTGGTGGCGGATTCTTCTCCAGAGTCTTTCAGCCAGGTGATGGCTTCCATGCCGGGGTTTCGATTCCATCCTACCGATGAGGAACTAGTCATGTACTATCTGAAGAGGAAGATGTATAGGAGGAGGCTGAAGCTCGATGTAATTCTTGAAACTGATGTCTACAAGTGGGATCCTGAGGAATTGCCTGGGCGGTCAGTGCTGAAAACTGGTGATAGGCAATGGTTCTTTTTCAGTCCTAGAGACAGAAAGTATCCTAATAGTGGTAGGACCAATCGAGCAACCAGACATGGGTACTGGAAAGCAACAGGGAAAGATCGTAACATTACCTACAATTCTCGGGCAGTTGGGGTGAAAAAGACGCTGGTTTTCTATAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACATTGGAAGAACAAGAGCTTGCTAGATGCCAGGATTGTAAGGACTATTATGCACTTTACAAGGTGTTCAAGAAAAGCGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCGCCATTTAAAGAAGAAGAATGGGTGGATGAGGACTTTGTAGATTTTAATGTTAATTCAGCTGGCAAGGAGGCTCAAATTTCATACGTTGATGAGGGTACTTCTGTTGATACTGTGACTTTTAATGGTCAAGAACAACCTTTGTTTGATGATGAACTTGATGAGATCTTGAAAAAAATGATGGATGATCAGATTCCTGACCTGCTCCCCCCGTGTCCTGCTGTATCTCAGGTTGTTGCTGAAGAAACGCAGAGTGTGGTGATGGATCAAATTTCTAATGAGGTGGCATTTGCTGAGCCAATCAAAATGTTTCATTCAAGCGATCACTACTATGACCCTACCCAATCAGTTATCTCTCACGTGGATGTTTCTGAAGCACCTGAAGTCACCTCTGGTCCCAGTGTTCAAGTAGAGGAGCCTCTCCTTCACGAGGATGACTTCTTGGAAATGAATGATCTCTTTGATCCTGAACCAGCACTGCCCAGGATAGAAAATCCTTTGGAGAACTTAGAGTTTGAAGATGGTTTAAGTGCATTTGACTTGTACTTTGATACAGAGATGTTTCTTCGTGACATAGGGCATATTGACCAGGGAACTGTTTCACATCCTCATATGAATACTTCTGACACTAATGTTGTGAATCAGCATTATCAGTCTCTGCCCCCTGGAGACATTGGAGATCCAAGTGAACCCTGGATGCTTCATGAAAGGAAGATAATTAGTTTAGCAGAACATGCTAATGTTTCTTACTCTTCATCAACCTCAGGTGGGGGTTATGAAACTGCCAGCTTGCCTGCCGAAGGTAATCATAATCAAAGTAGCATTGTGAGAGAAGTTCCTACAAGTAGATTGTCTTCTGCTCTCTGGGCCTTCCTTGACTCAATACCTACCACTCCTGCATCGGCTGCCGAAAATGCAAATCGGGCTCTTGAGCGGGTGTCTAGCTTTAGTAGGGTGAGAGATAATGTGAAGCAGGCAAGCATAGCCGCTGCCACTGTTGCTAATGAAACTGCAATTGTGAAGAGAGCAGGTAAAAGAAGGGGAATCTTCTTCTTCTTCTTGCCAGTTCTTGTTGCTTTATGTGCTTTTTTATGGGTTTCTATGGGAACATTGAGACTACCTGGGAGATTCACTCCTTGA 1977 0.438 MRLVVDQASLSCFFDHTTTPKSNILCRPKFDSVAKFHLDYVHTLSGSLTSTIFLSDHVVFVRCFLIRILDHRSGFCSVGILNFVFCIPGIESKMTIQSKMAVVADSSPESFSQVMASMPGFRFHPTDEELVMYYLKRKMYRRRLKLDVILETDVYKWDPEELPGRSVLKTGDRQWFFFSPRDRKYPNSGRTNRATRHGYWKATGKDRNITYNSRAVGVKKTLVFYRGRAPHGERTDWVMHEYTLEEQELARCQDCKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWVDEDFVDFNVNSAGKEAQISYVDEGTSVDTVTFNGQEQPLFDDELDEILKKMMDDQIPDLLPPCPAVSQVVAEETQSVVMDQISNEVAFAEPIKMFHSSDHYYDPTQSVISHVDVSEAPEVTSGPSVQVEEPLLHEDDFLEMNDLFDPEPALPRIENPLENLEFEDGLSAFDLYFDTEMFLRDIGHIDQGTVSHPHMNTSDTNVVNQHYQSLPPGDIGDPSEPWMLHERKIISLAEHANVSYSSSTSGGGYETASLPAEGNHNQSSIVREVPTSRLSSALWAFLDSIPTTPASAAENANRALERVSSFSRVRDNVKQASIAAATVANETAIVKRAGKRRGIFFFFLPVLVALCAFLWVSMGTLRLPGRFTP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3071 658 FunFam Nac domain-containing protein 86 126 270 - -
Acco02g3071 658 MobiDBLite consensus disorder prediction 530 550 - -
Acco02g3071 658 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 117 330 - -
Acco02g3071 658 Gene3D NAC domain 126 269 IPR036093 GO:0003677|GO:0006355
Acco02g3071 658 Pfam No apical meristem (NAM) protein 119 244 IPR003441 GO:0003677|GO:0006355
Acco02g3071 658 SUPERFAMILY NAC domain 115 267 IPR036093 GO:0003677|GO:0006355
Acco02g3071 658 ProSiteProfiles NAC domain profile. 117 267 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g3071 Acco-ChrAcco02 40985207 40991603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3071 103 655 NAC Transcription Factor Family AT1G34190 44.519 2.21e-136 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g3071 NAM 1.6e-35 No_clan