Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g3051 ATGGCGGGAGCTACAGGTAGAGCCCTTATCACTCTCTCTCTAAACCCCAACCTCCCTACGTTTGCACGCTTATCTCATGGCCGCGCCATTCCATTTCTCAAACTATCTGCAAGACCCAGTAGGGTTTTGCTAGGGTTTAGACCCCTCTGCTCCGTCACCTCCACTGCCACGGCCACCGTTTCCGATACAACGGTGTCCATTGATCCTGACCAAATCAAGCACTCTATTCTTCTTGAGAGACTCAGATTCAGGCACCTCAAAGACTCCTCTAAAACTCCAGAAATCAAGAAGTCAGCGAAATCAGTTGCTATCCCTGAGAGGGGTCGTGAGAATGAGGGGAAGAAATCAGAGAAGAGGAAATTGGTGGGAAGTTTTGAGGAGTTGGGCCTCAGCGATGAGGTAATGGGAGCCGTGAGGGAAATGAATATTGAGGTTCCCACTGAGATTCAGTGTATCGGCATCCCTGCTGTATTGGAAGGGAAGAGTGTCGTTTTGGGATCTCATACTGGTTCTGGCAAGACTCTTGCTTACATGCTTCCCCTTGTTCAGTCGCTTAGACAGGATGAACAATTGAATGGATTAGTTATGAAGCCCAGGCGTCCCCGGGCTGTTGTGCTATGCCCTACGAGGGAGTTGTCTGAGCAGGTATTTCGAGTTGCAAAATCTATTAGCCATCATGCAAGGTTAAGGTCTACAATGGTAAGTGGGGGTGGCCGTCTCAGGCCTCAAGAGGATTCCTTAAATAACCCCATTGACTTGGTTGTTGGTACTCCGGGAAGAATTCTGCAGCACATTGAGGAAGGCAACATGGTATATGGTGACATCAAATACTTGGTATTAGATGAGGCAGACACAATGTTTGATCGAGGTTTTGGTCCTGACATACGCAAGTTTATTGGTCCACTAAAGCATCGTGCATTAAAACCTAATGGCCTAGGTTTTCAGACTATCTTGGTTACCGCAACCATGACAAAGGCAGTGCAAAATCTGGTTGATGAGGAGTTTCAAGGCATTGTGCATCTACGAACATCAACACTACATAAAAAGATTGCTTCCGCTCGTCATGATTTTATTAAGCTGTCGGGTTCTGAAAACAAGCTGGAGGCACTGCTACAGGTTCTGGAGCCAAGCCTGGCAAAAGGAAATAGAGTGATGGTTTTCTGCAATACATTGAACTCTAGCCGTGCAGTGGATCATTTTCTCAGTGAAAATCAGATATCTGCCGTCAATTACCATGGAGAGGTACCAGCAGAGCAAAGGGTTGAAAACCTCCAAAAATTTAAAAGTGATGAAGATGATTGTCCTACATTAGTTTGCACAGACTTGGCAGCCAGGGGTCTGGATTTGGATGTGGATCATGTTATCATGTTTGATTTTCCTTTGAACTCTATTGACTACCTCCACCGCACCGGTAGAACAGCTCGTATGGGTGCAAAAGGGAAAGTAACTAGCTTGGTTGCCAAAAAAGACACAACCTTGGCCACTCGAATAGAAGAAGCAATAAGGAAGAATGAGAGCTTGGAGGCTATCAGCAGAGAAAATTTTAGGAGCGAGATTGCAAGGACCCAAATAAATCAGCAGAAGGGAAGGAATACCAAATTGGTAAAGGTTTCCAAAGCAAAAAACACTTCTACTGTACGTGCCACTTCCAGAAAAGCATCAAAACCATTAAAATCACCAAAAGCATCAAAAAGTTTTTCCAGTGTTAACGCTGGTTCTAGAAAAGCATCCAAACCATTAAAATCAGCGAAGGCAGGAGGGATTCAGGTTAAAAAATCTGTAAGATCTTCCGGTGCAAGCAGCCCGAAGAAAGCTTCAGCGGGGAAGAAGCAGACAAGTAGAAGAGACAGTGCTAGCAAGTCAGCGAATTCTAAACTGAGTGTTGTTGGTTTTAGGGGGAGGAGTTCCTCAAACAAGAACGAATCACAATTTTGA 1935 0.4512 MAGATGRALITLSLNPNLPTFARLSHGRAIPFLKLSARPSRVLLGFRPLCSVTSTATATVSDTTVSIDPDQIKHSILLERLRFRHLKDSSKTPEIKKSAKSVAIPERGRENEGKKSEKRKLVGSFEELGLSDEVMGAVREMNIEVPTEIQCIGIPAVLEGKSVVLGSHTGSGKTLAYMLPLVQSLRQDEQLNGLVMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARLRSTMVSGGGRLRPQEDSLNNPIDLVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKHRALKPNGLGFQTILVTATMTKAVQNLVDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQISAVNYHGEVPAEQRVENLQKFKSDEDDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDTTLATRIEEAIRKNESLEAISRENFRSEIARTQINQQKGRNTKLVKVSKAKNTSTVRATSRKASKPLKSPKASKSFSSVNAGSRKASKPLKSAKAGGIQVKKSVRSSGASSPKKASAGKKQTSRRDSASKSANSKLSVVGFRGRSSSNKNESQF 644
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco02g3051 644 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 154 341 IPR014001 -
Acco02g3051 644 Pfam DEAD/DEAH box helicase 147 330 IPR011545 GO:0003676|GO:0005524
Acco02g3051 644 CDD DEADc 134 333 - -
Acco02g3051 644 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 123 151 IPR014014 GO:0003724
Acco02g3051 644 Gene3D - 351 586 IPR027417 -
Acco02g3051 644 MobiDBLite consensus disorder prediction 617 644 - -
Acco02g3051 644 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 366 518 IPR001650 -
Acco02g3051 644 MobiDBLite consensus disorder prediction 524 644 - -
Acco02g3051 644 SMART ultradead3 142 361 IPR014001 -
Acco02g3051 644 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 64 513 - -
Acco02g3051 644 CDD SF2_C_DEAD 354 486 - -
Acco02g3051 644 Pfam Helicase conserved C-terminal domain 366 477 IPR001650 -
Acco02g3051 644 MobiDBLite consensus disorder prediction 560 575 - -
Acco02g3051 644 MobiDBLite consensus disorder prediction 89 118 - -
Acco02g3051 644 SMART helicmild6 395 477 IPR001650 -
Acco02g3051 644 MobiDBLite consensus disorder prediction 524 552 - -
Acco02g3051 644 Gene3D - 86 342 IPR027417 -
Acco02g3051 644 MobiDBLite consensus disorder prediction 593 607 - -
Acco02g3051 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 494 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco02g3051 Acco-ChrAcco02 40417725 40422321 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g3051 122 499 Eukaryotic Initiation Factors Gene Family AT3G19760 28.460 4.41e-41 152